Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.12□□□□□ -0.63
SgcbP82349 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcbP82349 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
SgcbP82349 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.11□□□□□ -0.63
SgcbP82349 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
SgcbP82349 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SgcbP82349 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.11□□□□□ -0.63
SgcbP82349 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.11□□□□□ -0.63
SgcbP82349 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SgcbP82349 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.11□□□□□ -0.63
SgcbP82349 Gm15703-201ENSMUST00000120250 880 ntBASIC11.11□□□□□ -0.63
SgcbP82349 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Gm31256-201ENSMUST00000194705 506 ntBASIC11.11□□□□□ -0.63
SgcbP82349 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.11□□□□□ -0.63
SgcbP82349 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.11□□□□□ -0.63
SgcbP82349 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.11□□□□□ -0.63
SgcbP82349 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.11□□□□□ -0.63
SgcbP82349 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.11□□□□□ -0.63
SgcbP82349 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC11.11□□□□□ -0.63
SgcbP82349 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.11□□□□□ -0.63
SgcbP82349 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.11□□□□□ -0.63
SgcbP82349 Gm10076-201ENSMUST00000073238 384 ntBASIC11.11□□□□□ -0.63
SgcbP82349 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
SgcbP82349 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SgcbP82349 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.11□□□□□ -0.63
SgcbP82349 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.11□□□□□ -0.63
SgcbP82349 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SgcbP82349 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcbP82349 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.11□□□□□ -0.63
SgcbP82349 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.11□□□□□ -0.63
SgcbP82349 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.1□□□□□ -0.63
SgcbP82349 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.1□□□□□ -0.63
SgcbP82349 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SgcbP82349 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.1□□□□□ -0.63
SgcbP82349 Gm13875-201ENSMUST00000120162 282 ntBASIC11.1□□□□□ -0.63
SgcbP82349 Gm13315-201ENSMUST00000120376 991 ntBASIC11.1□□□□□ -0.63
SgcbP82349 Gm14999-201ENSMUST00000121039 624 ntBASIC11.1□□□□□ -0.63
SgcbP82349 Gm11597-201ENSMUST00000121423 964 ntBASIC11.1□□□□□ -0.63
SgcbP82349 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.1□□□□□ -0.63
SgcbP82349 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.1□□□□□ -0.63
SgcbP82349 Gm27320-201ENSMUST00000184892 109 ntBASIC11.1□□□□□ -0.63
SgcbP82349 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.1□□□□□ -0.63
SgcbP82349 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SgcbP82349 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Gm7783-201ENSMUST00000204795 781 ntBASIC11.1□□□□□ -0.63
SgcbP82349 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.1□□□□□ -0.63
SgcbP82349 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
SgcbP82349 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
SgcbP82349 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.1□□□□□ -0.63
SgcbP82349 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SgcbP82349 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms