Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.28□□□□□ -0.6
Lsm3P62311 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Lsm3P62311 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm3P62311 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm3P62311 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm3P62311 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm3P62311 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm3P62311 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Lsm3P62311 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm3P62311 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm3P62311 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm3P62311 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm3P62311 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm3P62311 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm3P62311 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.27□□□□□ -0.61
Lsm3P62311 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.27□□□□□ -0.61
Lsm3P62311 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Lsm3P62311 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 Gm6415-201ENSMUST00000118488 348 ntBASIC11.27□□□□□ -0.61
Lsm3P62311 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Lsm3P62311 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.27□□□□□ -0.61
Lsm3P62311 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 Gm27622-201ENSMUST00000183779 60 ntBASIC11.27□□□□□ -0.61
Lsm3P62311 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.27□□□□□ -0.61
Lsm3P62311 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Lsm3P62311 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Lsm3P62311 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.27□□□□□ -0.61
Lsm3P62311 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Lsm3P62311 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.27□□□□□ -0.61
Lsm3P62311 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.27□□□□□ -0.61
Lsm3P62311 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm3P62311 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.26□□□□□ -0.61
Lsm3P62311 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
Lsm3P62311 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.26□□□□□ -0.61
Lsm3P62311 Gm11978-201ENSMUST00000122315 466 ntBASIC11.26□□□□□ -0.61
Lsm3P62311 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Gm18733-201ENSMUST00000173950 856 ntBASIC11.26□□□□□ -0.61
Lsm3P62311 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.26□□□□□ -0.61
Lsm3P62311 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.26□□□□□ -0.61
Lsm3P62311 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Lsm3P62311 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Lsm3P62311 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Lsm3P62311 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Lsm3P62311 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Lsm3P62311 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm3P62311 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.26□□□□□ -0.61
Lsm3P62311 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.25□□□□□ -0.61
Lsm3P62311 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.25□□□□□ -0.61
Lsm3P62311 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms