Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm28911-201ENSMUST00000188837 117 ntBASIC11.04□□□□□ -0.64
Sf3b6P59708 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.04□□□□□ -0.64
Sf3b6P59708 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.04□□□□□ -0.64
Sf3b6P59708 Gm45384-201ENSMUST00000210451 277 ntBASIC11.04□□□□□ -0.64
Sf3b6P59708 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3b6P59708 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Sf3b6P59708 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.04□□□□□ -0.64
Sf3b6P59708 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3b6P59708 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3b6P59708 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Sf3b6P59708 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.04□□□□□ -0.64
Sf3b6P59708 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3b6P59708 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3b6P59708 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3b6P59708 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3b6P59708 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3b6P59708 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3b6P59708 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sf3b6P59708 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3b6P59708 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3b6P59708 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3b6P59708 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3b6P59708 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3b6P59708 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3b6P59708 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3b6P59708 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3b6P59708 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.03□□□□□ -0.64
Sf3b6P59708 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sf3b6P59708 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.03□□□□□ -0.64
Sf3b6P59708 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.03□□□□□ -0.64
Sf3b6P59708 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.03□□□□□ -0.64
Sf3b6P59708 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.03□□□□□ -0.64
Sf3b6P59708 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Gm23363-201ENSMUST00000175024 79 ntBASIC11.03□□□□□ -0.64
Sf3b6P59708 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.03□□□□□ -0.64
Sf3b6P59708 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.03□□□□□ -0.64
Sf3b6P59708 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.03□□□□□ -0.64
Sf3b6P59708 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Gm16372-201ENSMUST00000073088 450 ntBASIC11.03□□□□□ -0.64
Sf3b6P59708 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sf3b6P59708 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC11.03□□□□□ -0.64
Sf3b6P59708 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.03□□□□□ -0.64
Sf3b6P59708 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sf3b6P59708 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.03□□□□□ -0.64
Sf3b6P59708 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.03□□□□□ -0.64
Sf3b6P59708 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3b6P59708 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sf3b6P59708 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sf3b6P59708 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sf3b6P59708 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Sf3b6P59708 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.02□□□□□ -0.64
Sf3b6P59708 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sf3b6P59708 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.02□□□□□ -0.64
Sf3b6P59708 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sf3b6P59708 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sf3b6P59708 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Sf3b6P59708 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sf3b6P59708 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sf3b6P59708 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Sf3b6P59708 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3b6P59708 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3b6P59708 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3b6P59708 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3b6P59708 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.02□□□□□ -0.65
Sf3b6P59708 Gm22121-201ENSMUST00000175148 54 ntBASIC11.02□□□□□ -0.65
Sf3b6P59708 Gm9002-201ENSMUST00000178437 499 ntBASIC11.02□□□□□ -0.65
Sf3b6P59708 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sf3b6P59708 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3b6P59708 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.02□□□□□ -0.65
Sf3b6P59708 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3b6P59708 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.02□□□□□ -0.65
Sf3b6P59708 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.02□□□□□ -0.65
Sf3b6P59708 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.02□□□□□ -0.65
Sf3b6P59708 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3b6P59708 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3b6P59708 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3b6P59708 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms