Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Nup43P59235 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Nup43P59235 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Nup43P59235 Gm11222-201ENSMUST00000119005 738 ntBASIC11.74□□□□□ -0.53
Nup43P59235 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.74□□□□□ -0.53
Nup43P59235 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.74□□□□□ -0.53
Nup43P59235 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.74□□□□□ -0.53
Nup43P59235 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.74□□□□□ -0.53
Nup43P59235 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.74□□□□□ -0.53
Nup43P59235 Gm30285-201ENSMUST00000214614 422 ntBASIC11.74□□□□□ -0.53
Nup43P59235 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.74□□□□□ -0.53
Nup43P59235 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.74□□□□□ -0.53
Nup43P59235 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Nup43P59235 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Nup43P59235 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.74□□□□□ -0.53
Nup43P59235 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.73□□□□□ -0.53
Nup43P59235 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Nup43P59235 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Nup43P59235 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Nup43P59235 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
Nup43P59235 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.73□□□□□ -0.53
Nup43P59235 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nup43P59235 Gm9083-201ENSMUST00000120423 819 ntBASIC11.73□□□□□ -0.53
Nup43P59235 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.73□□□□□ -0.53
Nup43P59235 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.73□□□□□ -0.53
Nup43P59235 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.73□□□□□ -0.53
Nup43P59235 Gm37102-201ENSMUST00000195740 1105 ntBASIC11.73□□□□□ -0.53
Nup43P59235 Gm43179-201ENSMUST00000198797 275 ntBASIC11.73□□□□□ -0.53
Nup43P59235 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.73□□□□□ -0.53
Nup43P59235 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.73□□□□□ -0.53
Nup43P59235 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.73□□□□□ -0.53
Nup43P59235 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 Cts7-204ENSMUST00000225321 1257 ntBASIC11.73□□□□□ -0.53
Nup43P59235 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup43P59235 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nup43P59235 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.72□□□□□ -0.53
Nup43P59235 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.72□□□□□ -0.53
Nup43P59235 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.72□□□□□ -0.53
Nup43P59235 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Nup43P59235 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Nup43P59235 Gm25214-201ENSMUST00000104573 129 ntBASIC11.72□□□□□ -0.53
Nup43P59235 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Nup43P59235 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.72□□□□□ -0.53
Nup43P59235 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Nup43P59235 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Nup43P59235 Gm44364-201ENSMUST00000198368 141 ntBASIC11.72□□□□□ -0.53
Nup43P59235 Gm43822-201ENSMUST00000200285 476 ntBASIC11.72□□□□□ -0.53
Nup43P59235 Gm44958-201ENSMUST00000203734 736 ntBASIC11.72□□□□□ -0.53
Nup43P59235 Gm45865-201ENSMUST00000211815 945 ntBASIC11.72□□□□□ -0.53
Nup43P59235 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup43P59235 Gm32390-201ENSMUST00000212713 1172 ntBASIC11.72□□□□□ -0.53
Nup43P59235 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms