Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tubgcp3P58854 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tubgcp3P58854 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tubgcp3P58854 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Tubgcp3P58854 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tubgcp3P58854 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tubgcp3P58854 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Tubgcp3P58854 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tubgcp3P58854 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tubgcp3P58854 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tubgcp3P58854 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tubgcp3P58854 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tubgcp3P58854 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tubgcp3P58854 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.69□□□□□ -0.38
Tubgcp3P58854 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Matn2-203ENSMUST00000226766 3252 ntBASIC12.68□□□□□ -0.38
Tubgcp3P58854 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Paupar-201ENSMUST00000194826 3482 ntBASIC12.68□□□□□ -0.38
Tubgcp3P58854 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Gm19184-201ENSMUST00000196798 928 ntBASIC12.68□□□□□ -0.38
Tubgcp3P58854 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
Tubgcp3P58854 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.68□□□□□ -0.38
Tubgcp3P58854 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Tubgcp3P58854 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.67□□□□□ -0.38
Tubgcp3P58854 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Gm11597-201ENSMUST00000121423 964 ntBASIC12.67□□□□□ -0.38
Tubgcp3P58854 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Gm9022-201ENSMUST00000182482 992 ntBASIC12.67□□□□□ -0.38
Tubgcp3P58854 Gm5781-201ENSMUST00000219792 443 ntBASIC12.67□□□□□ -0.38
Tubgcp3P58854 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.67□□□□□ -0.38
Tubgcp3P58854 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.67□□□□□ -0.38
Tubgcp3P58854 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms