Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.85□□□□□ -0.19
Tpm1P58771 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Tpm1P58771 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.85□□□□□ -0.19
Tpm1P58771 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.85□□□□□ -0.19
Tpm1P58771 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tpm1P58771 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.84□□□□□ -0.19
Tpm1P58771 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Tpm1P58771 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tpm1P58771 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tpm1P58771 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.84□□□□□ -0.19
Tpm1P58771 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tpm1P58771 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tpm1P58771 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tpm1P58771 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tpm1P58771 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.84□□□□□ -0.19
Tpm1P58771 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tpm1P58771 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.84□□□□□ -0.19
Tpm1P58771 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tpm1P58771 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.84□□□□□ -0.19
Tpm1P58771 Gm28631-201ENSMUST00000190740 334 ntBASIC13.84□□□□□ -0.19
Tpm1P58771 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.84□□□□□ -0.19
Tpm1P58771 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tpm1P58771 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tpm1P58771 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Tpm1P58771 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tpm1P58771 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tpm1P58771 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tpm1P58771 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tpm1P58771 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tpm1P58771 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tpm1P58771 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tpm1P58771 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.84□□□□□ -0.19
Tpm1P58771 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tpm1P58771 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC13.84□□□□□ -0.19
Tpm1P58771 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tpm1P58771 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Tpm1P58771 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Tpm1P58771 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tpm1P58771 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.19
Tpm1P58771 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Tpm1P58771 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tpm1P58771 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tpm1P58771 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Tpm1P58771 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Tpm1P58771 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.83□□□□□ -0.2
Tpm1P58771 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Tpm1P58771 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.83□□□□□ -0.2
Tpm1P58771 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.83□□□□□ -0.2
Tpm1P58771 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.83□□□□□ -0.2
Tpm1P58771 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Tpm1P58771 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
Tpm1P58771 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tpm1P58771 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm1P58771 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm1P58771 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm1P58771 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.82□□□□□ -0.2
Tpm1P58771 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm1P58771 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm1P58771 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.82□□□□□ -0.2
Tpm1P58771 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm1P58771 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Tpm1P58771 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm1P58771 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm1P58771 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tpm1P58771 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Tpm1P58771 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms