Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC9.66□□□□□ -0.86
Ctdsp1P58466 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ctdsp1P58466 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ctdsp1P58466 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ctdsp1P58466 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ctdsp1P58466 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.66□□□□□ -0.86
Ctdsp1P58466 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ctdsp1P58466 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Ctdsp1P58466 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Ctdsp1P58466 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ctdsp1P58466 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ctdsp1P58466 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ctdsp1P58466 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.66□□□□□ -0.86
Ctdsp1P58466 Gm37015-201ENSMUST00000192763 1521 ntBASIC9.66□□□□□ -0.86
Ctdsp1P58466 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Ctdsp1P58466 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ctdsp1P58466 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.66□□□□□ -0.86
Ctdsp1P58466 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ctdsp1P58466 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ctdsp1P58466 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ctdsp1P58466 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ctdsp1P58466 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ctdsp1P58466 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Gm44207-201ENSMUST00000204568 1424 ntBASIC9.65□□□□□ -0.86
Ctdsp1P58466 AC125374.1-201ENSMUST00000213573 1400 ntBASIC9.65□□□□□ -0.86
Ctdsp1P58466 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Gm12892-201ENSMUST00000117367 1146 ntBASIC9.65□□□□□ -0.86
Ctdsp1P58466 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Gm11439-201ENSMUST00000118598 409 ntBASIC9.65□□□□□ -0.86
Ctdsp1P58466 Gm14730-201ENSMUST00000122378 1045 ntBASIC9.65□□□□□ -0.86
Ctdsp1P58466 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Gm18916-201ENSMUST00000198264 1246 ntBASIC9.65□□□□□ -0.86
Ctdsp1P58466 Gm7498-201ENSMUST00000203282 1084 ntBASIC9.65□□□□□ -0.86
Ctdsp1P58466 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC9.65□□□□□ -0.86
Ctdsp1P58466 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Gm16476-201ENSMUST00000221544 139 ntBASIC9.65□□□□□ -0.86
Ctdsp1P58466 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Ctdsp1P58466 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ctdsp1P58466 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ctdsp1P58466 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Ctdsp1P58466 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ctdsp1P58466 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Ctdsp1P58466 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
Ctdsp1P58466 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.87
Ctdsp1P58466 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ctdsp1P58466 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Ctdsp1P58466 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
Ctdsp1P58466 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ctdsp1P58466 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ctdsp1P58466 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC9.64□□□□□ -0.87
Ctdsp1P58466 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ctdsp1P58466 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ctdsp1P58466 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC9.64□□□□□ -0.87
Ctdsp1P58466 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ctdsp1P58466 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ctdsp1P58466 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Ctdsp1P58466 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ctdsp1P58466 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ctdsp1P58466 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ctdsp1P58466 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ctdsp1P58466 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Ctdsp1P58466 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ctdsp1P58466 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Ctdsp1P58466 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ctdsp1P58466 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ctdsp1P58466 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms