Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 AU022133-201ENSMUST00000200601 873 ntBASIC13.24□□□□□ -0.29
NrlP54846 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.24□□□□□ -0.29
NrlP54846 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.24□□□□□ -0.29
NrlP54846 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.24□□□□□ -0.29
NrlP54846 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
NrlP54846 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
NrlP54846 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.24□□□□□ -0.29
NrlP54846 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NrlP54846 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
NrlP54846 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
NrlP54846 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NrlP54846 Gm13611-201ENSMUST00000118269 318 ntBASIC13.23□□□□□ -0.29
NrlP54846 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Gm13461-201ENSMUST00000120980 662 ntBASIC13.23□□□□□ -0.29
NrlP54846 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.23□□□□□ -0.29
NrlP54846 Mir1943-201ENSMUST00000158276 73 ntBASIC13.23□□□□□ -0.29
NrlP54846 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NrlP54846 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Gm7848-201ENSMUST00000210739 718 ntBASIC13.23□□□□□ -0.29
NrlP54846 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.23□□□□□ -0.29
NrlP54846 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
NrlP54846 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.23□□□□□ -0.29
NrlP54846 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
NrlP54846 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NrlP54846 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.23□□□□□ -0.29
NrlP54846 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.22□□□□□ -0.29
NrlP54846 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.22□□□□□ -0.29
NrlP54846 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
NrlP54846 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.22□□□□□ -0.29
NrlP54846 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.22□□□□□ -0.29
NrlP54846 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.22□□□□□ -0.29
NrlP54846 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Gm11597-201ENSMUST00000121423 964 ntBASIC13.22□□□□□ -0.29
NrlP54846 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.22□□□□□ -0.29
NrlP54846 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.22□□□□□ -0.29
NrlP54846 Gm18734-201ENSMUST00000172937 808 ntBASIC13.22□□□□□ -0.29
NrlP54846 Gm45118-201ENSMUST00000208928 825 ntBASIC13.22□□□□□ -0.29
NrlP54846 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
NrlP54846 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
NrlP54846 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NrlP54846 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NrlP54846 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
NrlP54846 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NrlP54846 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms