Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Msh6P54276 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Msh6P54276 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh6P54276 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh6P54276 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh6P54276 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Msh6P54276 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC15.66■□□□□ 0.1
Msh6P54276 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh6P54276 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh6P54276 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.66■□□□□ 0.1
Msh6P54276 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
Msh6P54276 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Msh6P54276 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC15.65■□□□□ 0.1
Msh6P54276 Gm9630-201ENSMUST00000178304 885 ntBASIC15.65■□□□□ 0.1
Msh6P54276 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 Gm37246-201ENSMUST00000192665 835 ntBASIC15.65■□□□□ 0.1
Msh6P54276 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC15.65■□□□□ 0.1
Msh6P54276 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC15.65■□□□□ 0.1
Msh6P54276 Gm5455-201ENSMUST00000058710 715 ntBASIC15.65■□□□□ 0.1
Msh6P54276 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Msh6P54276 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.65■□□□□ 0.1
Msh6P54276 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Msh6P54276 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
Msh6P54276 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Msh6P54276 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Msh6P54276 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh6P54276 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Msh6P54276 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC15.64■□□□□ 0.1
Msh6P54276 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.64■□□□□ 0.09
Msh6P54276 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Msh6P54276 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh6P54276 Gm5778-201ENSMUST00000171003 1072 ntBASIC15.64■□□□□ 0.09
Msh6P54276 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC15.64■□□□□ 0.09
Msh6P54276 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Msh6P54276 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC15.64■□□□□ 0.09
Msh6P54276 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh6P54276 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Msh6P54276 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh6P54276 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Msh6P54276 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.64■□□□□ 0.09
Msh6P54276 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC15.64■□□□□ 0.09
Msh6P54276 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
Msh6P54276 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Msh6P54276 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh6P54276 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Msh6P54276 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh6P54276 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh6P54276 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Msh6P54276 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh6P54276 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Msh6P54276 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh6P54276 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.63■□□□□ 0.09
Msh6P54276 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Msh6P54276 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Msh6P54276 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh6P54276 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh6P54276 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Msh6P54276 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh6P54276 Gm23085-201ENSMUST00000157849 293 ntBASIC15.63■□□□□ 0.09
Msh6P54276 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC15.63■□□□□ 0.09
Msh6P54276 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Msh6P54276 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Msh6P54276 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Msh6P54276 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Msh6P54276 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh6P54276 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh6P54276 Gm5780-201ENSMUST00000217774 1834 ntBASIC15.63■□□□□ 0.09
Msh6P54276 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh6P54276 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC15.63■□□□□ 0.09
Msh6P54276 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC15.63■□□□□ 0.09
Msh6P54276 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh6P54276 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh6P54276 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh6P54276 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh6P54276 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Msh6P54276 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Msh6P54276 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh6P54276 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh6P54276 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Msh6P54276 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms