Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm2991-201ENSMUST00000173338 480 ntBASIC12.29□□□□□ -0.44
Pdx1P52946 Gm27023-201ENSMUST00000182372 285 ntBASIC12.29□□□□□ -0.44
Pdx1P52946 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.29□□□□□ -0.44
Pdx1P52946 Gm44124-201ENSMUST00000204159 472 ntBASIC12.29□□□□□ -0.44
Pdx1P52946 Cts7-204ENSMUST00000225321 1257 ntBASIC12.29□□□□□ -0.44
Pdx1P52946 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pdx1P52946 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.29□□□□□ -0.44
Pdx1P52946 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Pdx1P52946 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.28□□□□□ -0.44
Pdx1P52946 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pdx1P52946 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pdx1P52946 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.28□□□□□ -0.44
Pdx1P52946 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pdx1P52946 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pdx1P52946 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pdx1P52946 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Mir1938-201ENSMUST00000158746 100 ntBASIC12.28□□□□□ -0.44
Pdx1P52946 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Pdx1P52946 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.28□□□□□ -0.44
Pdx1P52946 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pdx1P52946 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.28□□□□□ -0.44
Pdx1P52946 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.28□□□□□ -0.44
Pdx1P52946 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.28□□□□□ -0.44
Pdx1P52946 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.28□□□□□ -0.44
Pdx1P52946 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.28□□□□□ -0.44
Pdx1P52946 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pdx1P52946 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.28□□□□□ -0.44
Pdx1P52946 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdx1P52946 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pdx1P52946 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.27□□□□□ -0.44
Pdx1P52946 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pdx1P52946 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pdx1P52946 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Pdx1P52946 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pdx1P52946 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdx1P52946 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdx1P52946 Gm15198-201ENSMUST00000117283 177 ntBASIC12.27□□□□□ -0.45
Pdx1P52946 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pdx1P52946 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pdx1P52946 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.27□□□□□ -0.45
Pdx1P52946 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.27□□□□□ -0.45
Pdx1P52946 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.27□□□□□ -0.45
Pdx1P52946 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.27□□□□□ -0.45
Pdx1P52946 Gm45331-201ENSMUST00000209868 554 ntBASIC12.27□□□□□ -0.45
Pdx1P52946 Gm45865-201ENSMUST00000211815 945 ntBASIC12.27□□□□□ -0.45
Pdx1P52946 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pdx1P52946 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.27□□□□□ -0.45
Pdx1P52946 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdx1P52946 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdx1P52946 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdx1P52946 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdx1P52946 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdx1P52946 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdx1P52946 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Pdx1P52946 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pdx1P52946 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms