Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.69□□□□□ -0.22
Brca1P48754 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Brca1P48754 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.69□□□□□ -0.22
Brca1P48754 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Brca1P48754 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.69□□□□□ -0.22
Brca1P48754 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Brca1P48754 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brca1P48754 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brca1P48754 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Brca1P48754 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Brca1P48754 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Brca1P48754 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brca1P48754 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.69□□□□□ -0.22
Brca1P48754 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.69□□□□□ -0.22
Brca1P48754 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.69□□□□□ -0.22
Brca1P48754 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brca1P48754 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Brca1P48754 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Brca1P48754 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Brca1P48754 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.69□□□□□ -0.22
Brca1P48754 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.69□□□□□ -0.22
Brca1P48754 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.69□□□□□ -0.22
Brca1P48754 Gm5451-201ENSMUST00000080545 579 ntBASIC13.69□□□□□ -0.22
Brca1P48754 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brca1P48754 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brca1P48754 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Brca1P48754 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brca1P48754 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brca1P48754 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brca1P48754 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Brca1P48754 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Brca1P48754 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brca1P48754 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Brca1P48754 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brca1P48754 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.68□□□□□ -0.22
Brca1P48754 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.68□□□□□ -0.22
Brca1P48754 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Brca1P48754 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Brca1P48754 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC13.68□□□□□ -0.22
Brca1P48754 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.68□□□□□ -0.22
Brca1P48754 Gm35713-201ENSMUST00000210516 199 ntBASIC13.68□□□□□ -0.22
Brca1P48754 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Brca1P48754 Gm9661-201ENSMUST00000221611 1122 ntBASIC13.68□□□□□ -0.22
Brca1P48754 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.68□□□□□ -0.22
Brca1P48754 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brca1P48754 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brca1P48754 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brca1P48754 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brca1P48754 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.68□□□□□ -0.22
Brca1P48754 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brca1P48754 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.68□□□□□ -0.22
Brca1P48754 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brca1P48754 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.68□□□□□ -0.22
Brca1P48754 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brca1P48754 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brca1P48754 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brca1P48754 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Brca1P48754 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.67□□□□□ -0.22
Brca1P48754 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Brca1P48754 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.67□□□□□ -0.22
Brca1P48754 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC13.67□□□□□ -0.22
Brca1P48754 Gm10807-201ENSMUST00000177134 795 ntBASIC13.67□□□□□ -0.22
Brca1P48754 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC13.67□□□□□ -0.22
Brca1P48754 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Brca1P48754 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Brca1P48754 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.67□□□□□ -0.22
Brca1P48754 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.67□□□□□ -0.22
Brca1P48754 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.67□□□□□ -0.22
Brca1P48754 Gm12943-201ENSMUST00000119616 210 ntBASIC13.67□□□□□ -0.22
Brca1P48754 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.67□□□□□ -0.22
Brca1P48754 Gm12783-201ENSMUST00000121425 397 ntBASIC13.67□□□□□ -0.22
Brca1P48754 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.67□□□□□ -0.22
Brca1P48754 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brca1P48754 Mir6407-201ENSMUST00000184510 101 ntBASIC13.67□□□□□ -0.22
Brca1P48754 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC13.67□□□□□ -0.22
Brca1P48754 Gm45113-201ENSMUST00000207518 165 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms