Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
GdnfP48540 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.92□□□□□ -0.66
GdnfP48540 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
GdnfP48540 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
GdnfP48540 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
GdnfP48540 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.92□□□□□ -0.66
GdnfP48540 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.92□□□□□ -0.66
GdnfP48540 Proscos-202ENSMUST00000178990 666 ntBASIC10.92□□□□□ -0.66
GdnfP48540 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.92□□□□□ -0.66
GdnfP48540 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.92□□□□□ -0.66
GdnfP48540 Gm45925-201ENSMUST00000218882 744 ntBASIC10.92□□□□□ -0.66
GdnfP48540 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.92□□□□□ -0.66
GdnfP48540 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.92□□□□□ -0.66
GdnfP48540 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Gm5356-201ENSMUST00000093326 615 ntBASIC10.92□□□□□ -0.66
GdnfP48540 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
GdnfP48540 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.92□□□□□ -0.66
GdnfP48540 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.92□□□□□ -0.66
GdnfP48540 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.92□□□□□ -0.66
GdnfP48540 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
GdnfP48540 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
GdnfP48540 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
GdnfP48540 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.92□□□□□ -0.66
GdnfP48540 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.91□□□□□ -0.66
GdnfP48540 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.91□□□□□ -0.66
GdnfP48540 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
GdnfP48540 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.91□□□□□ -0.66
GdnfP48540 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
GdnfP48540 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
GdnfP48540 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Gm15806-201ENSMUST00000120696 955 ntBASIC10.91□□□□□ -0.66
GdnfP48540 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.91□□□□□ -0.66
GdnfP48540 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC10.91□□□□□ -0.66
GdnfP48540 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.91□□□□□ -0.66
GdnfP48540 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Gm9630-201ENSMUST00000178304 885 ntBASIC10.91□□□□□ -0.66
GdnfP48540 Gm27892-201ENSMUST00000185017 106 ntBASIC10.91□□□□□ -0.66
GdnfP48540 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
GdnfP48540 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.91□□□□□ -0.66
GdnfP48540 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.91□□□□□ -0.66
GdnfP48540 Gm5035-201ENSMUST00000215581 927 ntBASIC10.91□□□□□ -0.66
GdnfP48540 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
GdnfP48540 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
GdnfP48540 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.91□□□□□ -0.66
GdnfP48540 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.91□□□□□ -0.66
GdnfP48540 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.91□□□□□ -0.66
GdnfP48540 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.91□□□□□ -0.66
GdnfP48540 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.91□□□□□ -0.66
GdnfP48540 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
GdnfP48540 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
GdnfP48540 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.91□□□□□ -0.66
GdnfP48540 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
GdnfP48540 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
GdnfP48540 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
GdnfP48540 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
GdnfP48540 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
GdnfP48540 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 156.2 ms