Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Rfx3P48381 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Gm5035-201ENSMUST00000215581 927 ntBASIC11.24□□□□□ -0.61
Rfx3P48381 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.24□□□□□ -0.61
Rfx3P48381 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rfx3P48381 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rfx3P48381 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rfx3P48381 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfx3P48381 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.23□□□□□ -0.61
Rfx3P48381 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rfx3P48381 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rfx3P48381 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rfx3P48381 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rfx3P48381 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.23□□□□□ -0.61
Rfx3P48381 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfx3P48381 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfx3P48381 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfx3P48381 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Rfx3P48381 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Rfx3P48381 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfx3P48381 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.23□□□□□ -0.61
Rfx3P48381 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rfx3P48381 Gm4271-201ENSMUST00000174444 973 ntBASIC11.23□□□□□ -0.61
Rfx3P48381 Gm22121-201ENSMUST00000175148 54 ntBASIC11.23□□□□□ -0.61
Rfx3P48381 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.23□□□□□ -0.61
Rfx3P48381 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.23□□□□□ -0.61
Rfx3P48381 Gm4768-201ENSMUST00000206199 686 ntBASIC11.23□□□□□ -0.61
Rfx3P48381 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Rfx3P48381 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfx3P48381 Gm6091-201ENSMUST00000098307 165 ntBASIC11.23□□□□□ -0.61
Rfx3P48381 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Rfx3P48381 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfx3P48381 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rfx3P48381 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.23□□□□□ -0.61
Rfx3P48381 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rfx3P48381 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.23□□□□□ -0.61
Rfx3P48381 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rfx3P48381 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rfx3P48381 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfx3P48381 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfx3P48381 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfx3P48381 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfx3P48381 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Rfx3P48381 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfx3P48381 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Rfx3P48381 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfx3P48381 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.23□□□□□ -0.61
Rfx3P48381 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.23□□□□□ -0.61
Rfx3P48381 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfx3P48381 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Rfx3P48381 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Rfx3P48381 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Rfx3P48381 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Rfx3P48381 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Rfx3P48381 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.22□□□□□ -0.61
Rfx3P48381 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.22□□□□□ -0.61
Rfx3P48381 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.22□□□□□ -0.61
Rfx3P48381 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.22□□□□□ -0.61
Rfx3P48381 Gm8602-201ENSMUST00000184045 607 ntBASIC11.22□□□□□ -0.61
Rfx3P48381 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.22□□□□□ -0.61
Rfx3P48381 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.22□□□□□ -0.61
Rfx3P48381 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.22□□□□□ -0.61
Rfx3P48381 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.22□□□□□ -0.61
Rfx3P48381 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Rfx3P48381 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.22□□□□□ -0.61
Rfx3P48381 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.22□□□□□ -0.61
Rfx3P48381 Gm7561-201ENSMUST00000211203 886 ntBASIC11.22□□□□□ -0.61
Rfx3P48381 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Gm19163-201ENSMUST00000223313 780 ntBASIC11.22□□□□□ -0.61
Rfx3P48381 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.22□□□□□ -0.61
Rfx3P48381 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfx3P48381 Gm25857-201ENSMUST00000082788 129 ntBASIC11.22□□□□□ -0.61
Rfx3P48381 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms