Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Gli1P47806 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Gli1P47806 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.14□□□□□ -0.47
Gli1P47806 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Gli1P47806 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.14□□□□□ -0.47
Gli1P47806 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.14□□□□□ -0.47
Gli1P47806 Gm13342-201ENSMUST00000121055 207 ntBASIC12.14□□□□□ -0.47
Gli1P47806 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.14□□□□□ -0.47
Gli1P47806 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.14□□□□□ -0.47
Gli1P47806 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Gli1P47806 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.14□□□□□ -0.47
Gli1P47806 Gm27682-201ENSMUST00000183930 110 ntBASIC12.14□□□□□ -0.47
Gli1P47806 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.14□□□□□ -0.47
Gli1P47806 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Gm4857-201ENSMUST00000192718 785 ntBASIC12.14□□□□□ -0.47
Gli1P47806 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.14□□□□□ -0.47
Gli1P47806 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.14□□□□□ -0.47
Gli1P47806 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.14□□□□□ -0.47
Gli1P47806 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
Gli1P47806 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.14□□□□□ -0.47
Gli1P47806 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.14□□□□□ -0.47
Gli1P47806 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gli1P47806 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gli1P47806 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.13□□□□□ -0.47
Gli1P47806 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.13□□□□□ -0.47
Gli1P47806 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gli1P47806 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gli1P47806 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gli1P47806 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gli1P47806 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gli1P47806 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gli1P47806 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gli1P47806 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.13□□□□□ -0.47
Gli1P47806 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gli1P47806 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gli1P47806 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gli1P47806 Gm22018-201ENSMUST00000104357 131 ntBASIC12.13□□□□□ -0.47
Gli1P47806 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.13□□□□□ -0.47
Gli1P47806 Gm15236-201ENSMUST00000117309 379 ntBASIC12.13□□□□□ -0.47
Gli1P47806 Gm16202-201ENSMUST00000117532 544 ntBASIC12.13□□□□□ -0.47
Gli1P47806 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.13□□□□□ -0.47
Gli1P47806 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.13□□□□□ -0.47
Gli1P47806 Gm16570-201ENSMUST00000161951 436 ntBASIC12.13□□□□□ -0.47
Gli1P47806 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.13□□□□□ -0.47
Gli1P47806 Gm4271-201ENSMUST00000174444 973 ntBASIC12.13□□□□□ -0.47
Gli1P47806 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.13□□□□□ -0.47
Gli1P47806 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Gli1P47806 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.13□□□□□ -0.47
Gli1P47806 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gli1P47806 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gli1P47806 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gli1P47806 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gli1P47806 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gli1P47806 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.13□□□□□ -0.47
Gli1P47806 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gli1P47806 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gli1P47806 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gli1P47806 Cog3-203ENSMUST00000227473 4197 ntBASIC12.13□□□□□ -0.47
Gli1P47806 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Gli1P47806 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gli1P47806 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.13□□□□□ -0.47
Gli1P47806 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gli1P47806 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gli1P47806 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.13□□□□□ -0.47
Gli1P47806 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.13□□□□□ -0.47
Gli1P47806 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gli1P47806 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gli1P47806 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms