Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl12P40224 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl12P40224 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl12P40224 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.75□□□□□ -0.37
Cxcl12P40224 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl12P40224 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl12P40224 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Cxcl12P40224 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Cxcl12P40224 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Cxcl12P40224 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl12P40224 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl12P40224 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl12P40224 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.74□□□□□ -0.37
Cxcl12P40224 Gm25545-201ENSMUST00000122673 323 ntBASIC12.74□□□□□ -0.37
Cxcl12P40224 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.74□□□□□ -0.37
Cxcl12P40224 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl12P40224 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.74□□□□□ -0.37
Cxcl12P40224 Gm23119-201ENSMUST00000158610 140 ntBASIC12.74□□□□□ -0.37
Cxcl12P40224 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.74□□□□□ -0.37
Cxcl12P40224 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl12P40224 Gm4654-201ENSMUST00000183305 982 ntBASIC12.74□□□□□ -0.37
Cxcl12P40224 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.74□□□□□ -0.37
Cxcl12P40224 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl12P40224 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cxcl12P40224 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.74□□□□□ -0.37
Cxcl12P40224 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl12P40224 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl12P40224 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl12P40224 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cxcl12P40224 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cxcl12P40224 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cxcl12P40224 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl12P40224 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.74□□□□□ -0.37
Cxcl12P40224 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl12P40224 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Cxcl12P40224 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cxcl12P40224 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.73□□□□□ -0.37
Cxcl12P40224 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.73□□□□□ -0.37
Cxcl12P40224 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.73□□□□□ -0.37
Cxcl12P40224 Gm22920-201ENSMUST00000102175 109 ntBASIC12.73□□□□□ -0.37
Cxcl12P40224 Rprl1-201ENSMUST00000158050 327 ntBASIC12.73□□□□□ -0.37
Cxcl12P40224 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.73□□□□□ -0.37
Cxcl12P40224 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 Gm8956-201ENSMUST00000203939 825 ntBASIC12.73□□□□□ -0.37
Cxcl12P40224 Gm35713-201ENSMUST00000210516 199 ntBASIC12.73□□□□□ -0.37
Cxcl12P40224 Gm9139-201ENSMUST00000218817 700 ntBASIC12.73□□□□□ -0.37
Cxcl12P40224 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.73□□□□□ -0.37
Cxcl12P40224 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.73□□□□□ -0.37
Cxcl12P40224 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.73□□□□□ -0.37
Cxcl12P40224 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 Gm5705-201ENSMUST00000066241 711 ntBASIC12.73□□□□□ -0.37
Cxcl12P40224 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Cxcl12P40224 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cxcl12P40224 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.73□□□□□ -0.37
Cxcl12P40224 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cxcl12P40224 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl12P40224 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl12P40224 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl12P40224 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl12P40224 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.72□□□□□ -0.37
Cxcl12P40224 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cxcl12P40224 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cxcl12P40224 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl12P40224 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl12P40224 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Cxcl12P40224 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.72□□□□□ -0.37
Cxcl12P40224 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl12P40224 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl12P40224 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cxcl12P40224 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Cxcl12P40224 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl12P40224 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.72□□□□□ -0.37
Cxcl12P40224 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.72□□□□□ -0.37
Cxcl12P40224 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.72□□□□□ -0.37
Cxcl12P40224 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.72□□□□□ -0.37
Cxcl12P40224 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.72□□□□□ -0.37
Cxcl12P40224 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl12P40224 Gm21092-201ENSMUST00000178995 955 ntBASIC12.72□□□□□ -0.37
Cxcl12P40224 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.72□□□□□ -0.37
Cxcl12P40224 Gm29499-201ENSMUST00000189151 486 ntBASIC12.72□□□□□ -0.37
Cxcl12P40224 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms