Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
Chd1P40201 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC18.18■□□□□ 0.5
Chd1P40201 Gm23694-201ENSMUST00000179335 110 ntBASIC18.18■□□□□ 0.5
Chd1P40201 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC18.18■□□□□ 0.5
Chd1P40201 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Chd1P40201 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Chd1P40201 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1P40201 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1P40201 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1P40201 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1P40201 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Chd1P40201 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Chd1P40201 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1P40201 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1P40201 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Chd1P40201 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1P40201 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1P40201 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1P40201 Gm14234-201ENSMUST00000119539 845 ntBASIC18.17■□□□□ 0.5
Chd1P40201 Gm13981-201ENSMUST00000122360 447 ntBASIC18.17■□□□□ 0.5
Chd1P40201 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC18.17■□□□□ 0.5
Chd1P40201 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC18.17■□□□□ 0.5
Chd1P40201 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC18.17■□□□□ 0.5
Chd1P40201 Gm18010-201ENSMUST00000203553 202 ntBASIC18.17■□□□□ 0.5
Chd1P40201 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC18.17■□□□□ 0.5
Chd1P40201 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1P40201 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Chd1P40201 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1P40201 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1P40201 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chd1P40201 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1P40201 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1P40201 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC18.16■□□□□ 0.5
Chd1P40201 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1P40201 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1P40201 Gm13347-201ENSMUST00000120298 1353 ntBASIC18.16■□□□□ 0.5
Chd1P40201 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1P40201 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1P40201 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1P40201 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1P40201 Gm16547-201ENSMUST00000159474 293 ntBASIC18.16■□□□□ 0.5
Chd1P40201 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1P40201 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1P40201 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC18.16■□□□□ 0.5
Chd1P40201 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC18.16■□□□□ 0.5
Chd1P40201 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1P40201 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1P40201 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC18.16■□□□□ 0.5
Chd1P40201 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1P40201 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1P40201 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Chd1P40201 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1P40201 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd1P40201 AC160405.1-201ENSMUST00000218207 1545 ntBASIC18.16■□□□□ 0.5
Chd1P40201 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1P40201 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC18.15■□□□□ 0.5
Chd1P40201 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Chd1P40201 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1P40201 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1P40201 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1P40201 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC18.15■□□□□ 0.5
Chd1P40201 Gm16305-201ENSMUST00000140747 556 ntBASIC18.15■□□□□ 0.5
Chd1P40201 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1P40201 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1P40201 AC152169.1-201ENSMUST00000223901 701 ntBASIC18.15■□□□□ 0.5
Chd1P40201 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Chd1P40201 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Chd1P40201 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1P40201 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1P40201 Gm2420-201ENSMUST00000119864 2149 ntBASIC18.15■□□□□ 0.5
Chd1P40201 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1P40201 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1P40201 AC151895.1-201ENSMUST00000219025 1742 ntBASIC18.15■□□□□ 0.5
Chd1P40201 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1P40201 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1P40201 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1P40201 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1P40201 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Chd1P40201 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC18.15■□□□□ 0.5
Chd1P40201 Gm15549-201ENSMUST00000121595 622 ntBASIC18.15■□□□□ 0.5
Chd1P40201 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1P40201 CT025603.1-201ENSMUST00000224040 448 ntBASIC18.15■□□□□ 0.5
Chd1P40201 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC18.15■□□□□ 0.5
Chd1P40201 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms