Protein–RNA interactions for Protein: P35822

Ptprk, Receptor-type tyrosine-protein phosphatase kappa, mousemouse

Predictions only

Length 1,457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtprkP35822 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PtprkP35822 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
PtprkP35822 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
PtprkP35822 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PtprkP35822 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PtprkP35822 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PtprkP35822 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PtprkP35822 Gm18198-201ENSMUST00000204986 1551 ntBASIC19.39■□□□□ 0.69
PtprkP35822 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PtprkP35822 Gm17213-201ENSMUST00000165161 1360 ntBASIC19.39■□□□□ 0.69
PtprkP35822 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PtprkP35822 Gm11660-201ENSMUST00000120955 412 ntBASIC19.39■□□□□ 0.69
PtprkP35822 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PtprkP35822 Gm38151-201ENSMUST00000195085 289 ntBASIC19.39■□□□□ 0.69
PtprkP35822 AC113082.1-201ENSMUST00000217324 327 ntBASIC19.39■□□□□ 0.69
PtprkP35822 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PtprkP35822 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PtprkP35822 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PtprkP35822 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PtprkP35822 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PtprkP35822 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PtprkP35822 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PtprkP35822 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PtprkP35822 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC19.39■□□□□ 0.69
PtprkP35822 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PtprkP35822 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PtprkP35822 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PtprkP35822 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PtprkP35822 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PtprkP35822 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PtprkP35822 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC19.38■□□□□ 0.69
PtprkP35822 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PtprkP35822 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PtprkP35822 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PtprkP35822 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PtprkP35822 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PtprkP35822 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
PtprkP35822 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PtprkP35822 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PtprkP35822 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PtprkP35822 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC19.38■□□□□ 0.69
PtprkP35822 Gm3551-201ENSMUST00000190750 664 ntBASIC19.38■□□□□ 0.69
PtprkP35822 Gm44421-201ENSMUST00000205064 1221 ntBASIC19.38■□□□□ 0.69
PtprkP35822 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PtprkP35822 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC19.38■□□□□ 0.69
PtprkP35822 Gm40879-201ENSMUST00000220759 612 ntBASIC19.38■□□□□ 0.69
PtprkP35822 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PtprkP35822 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC19.38■□□□□ 0.69
PtprkP35822 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PtprkP35822 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PtprkP35822 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PtprkP35822 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PtprkP35822 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PtprkP35822 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PtprkP35822 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PtprkP35822 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 AC129931.1-201ENSMUST00000228865 1861 ntBASIC19.37■□□□□ 0.69
PtprkP35822 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PtprkP35822 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PtprkP35822 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC19.37■□□□□ 0.69
PtprkP35822 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC19.37■□□□□ 0.69
PtprkP35822 Gm4034-201ENSMUST00000187674 480 ntBASIC19.37■□□□□ 0.69
PtprkP35822 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 AC098716.1-201ENSMUST00000213527 703 ntBASIC19.37■□□□□ 0.69
PtprkP35822 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC19.37■□□□□ 0.69
PtprkP35822 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC19.37■□□□□ 0.69
PtprkP35822 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PtprkP35822 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC19.37■□□□□ 0.69
PtprkP35822 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
PtprkP35822 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PtprkP35822 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PtprkP35822 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
PtprkP35822 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PtprkP35822 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PtprkP35822 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC19.36■□□□□ 0.69
PtprkP35822 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PtprkP35822 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC19.36■□□□□ 0.69
PtprkP35822 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PtprkP35822 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PtprkP35822 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC19.36■□□□□ 0.69
PtprkP35822 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PtprkP35822 Gm43447-201ENSMUST00000198471 1535 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms