Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.47□□□□□ -0.57
Sftpa1P35242 Gm15881-201ENSMUST00000148792 942 ntBASIC11.47□□□□□ -0.57
Sftpa1P35242 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Sftpa1P35242 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Sftpa1P35242 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.47□□□□□ -0.57
Sftpa1P35242 Gm18304-201ENSMUST00000189162 546 ntBASIC11.47□□□□□ -0.57
Sftpa1P35242 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.47□□□□□ -0.57
Sftpa1P35242 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Sftpa1P35242 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sftpa1P35242 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.47□□□□□ -0.57
Sftpa1P35242 Gm9463-201ENSMUST00000206707 601 ntBASIC11.47□□□□□ -0.57
Sftpa1P35242 Gm45550-201ENSMUST00000209380 946 ntBASIC11.47□□□□□ -0.57
Sftpa1P35242 Gm807-202ENSMUST00000224929 408 ntBASIC11.47□□□□□ -0.57
Sftpa1P35242 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.47□□□□□ -0.57
Sftpa1P35242 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sftpa1P35242 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Sftpa1P35242 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sftpa1P35242 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sftpa1P35242 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sftpa1P35242 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sftpa1P35242 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sftpa1P35242 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.47□□□□□ -0.57
Sftpa1P35242 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sftpa1P35242 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sftpa1P35242 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sftpa1P35242 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sftpa1P35242 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sftpa1P35242 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sftpa1P35242 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Sftpa1P35242 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.46□□□□□ -0.57
Sftpa1P35242 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.46□□□□□ -0.57
Sftpa1P35242 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.46□□□□□ -0.57
Sftpa1P35242 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Sftpa1P35242 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Sftpa1P35242 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.46□□□□□ -0.57
Sftpa1P35242 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.46□□□□□ -0.57
Sftpa1P35242 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.46□□□□□ -0.57
Sftpa1P35242 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Gm15703-201ENSMUST00000120250 880 ntBASIC11.46□□□□□ -0.57
Sftpa1P35242 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.46□□□□□ -0.57
Sftpa1P35242 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.46□□□□□ -0.57
Sftpa1P35242 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.46□□□□□ -0.57
Sftpa1P35242 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.46□□□□□ -0.57
Sftpa1P35242 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Sftpa1P35242 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.46□□□□□ -0.57
Sftpa1P35242 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sftpa1P35242 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.46□□□□□ -0.57
Sftpa1P35242 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sftpa1P35242 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sftpa1P35242 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sftpa1P35242 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sftpa1P35242 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sftpa1P35242 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
Sftpa1P35242 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sftpa1P35242 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sftpa1P35242 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sftpa1P35242 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sftpa1P35242 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sftpa1P35242 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.46□□□□□ -0.58
Sftpa1P35242 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sftpa1P35242 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sftpa1P35242 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sftpa1P35242 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sftpa1P35242 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sftpa1P35242 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sftpa1P35242 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sftpa1P35242 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.45□□□□□ -0.58
Sftpa1P35242 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sftpa1P35242 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sftpa1P35242 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sftpa1P35242 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sftpa1P35242 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sftpa1P35242 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sftpa1P35242 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sftpa1P35242 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Sftpa1P35242 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Sftpa1P35242 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sftpa1P35242 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.45□□□□□ -0.58
Sftpa1P35242 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.45□□□□□ -0.58
Sftpa1P35242 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms