Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Nckap1P28660 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Nckap1P28660 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Nckap1P28660 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Gm14208-201ENSMUST00000119645 678 ntBASIC12.4□□□□□ -0.42
Nckap1P28660 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.4□□□□□ -0.42
Nckap1P28660 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.4□□□□□ -0.42
Nckap1P28660 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nckap1P28660 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Nckap1P28660 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Nckap1P28660 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.39□□□□□ -0.43
Nckap1P28660 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.39□□□□□ -0.43
Nckap1P28660 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.39□□□□□ -0.43
Nckap1P28660 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.39□□□□□ -0.43
Nckap1P28660 Gm8913-201ENSMUST00000209491 641 ntBASIC12.39□□□□□ -0.43
Nckap1P28660 Gm45598-202ENSMUST00000210719 986 ntBASIC12.39□□□□□ -0.43
Nckap1P28660 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.39□□□□□ -0.43
Nckap1P28660 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Nckap1P28660 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Nckap1P28660 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Nckap1P28660 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.39□□□□□ -0.43
Nckap1P28660 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.39□□□□□ -0.43
Nckap1P28660 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Nckap1P28660 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.39□□□□□ -0.43
Nckap1P28660 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nckap1P28660 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nckap1P28660 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Nckap1P28660 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.38□□□□□ -0.43
Nckap1P28660 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nckap1P28660 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.38□□□□□ -0.43
Nckap1P28660 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.38□□□□□ -0.43
Nckap1P28660 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.38□□□□□ -0.43
Nckap1P28660 Mir5120-201ENSMUST00000175020 78 ntBASIC12.38□□□□□ -0.43
Nckap1P28660 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nckap1P28660 Gm9230-201ENSMUST00000188228 532 ntBASIC12.38□□□□□ -0.43
Nckap1P28660 Gm17812-201ENSMUST00000204935 318 ntBASIC12.38□□□□□ -0.43
Nckap1P28660 Gm19187-201ENSMUST00000206781 892 ntBASIC12.38□□□□□ -0.43
Nckap1P28660 Gm45224-201ENSMUST00000208203 414 ntBASIC12.38□□□□□ -0.43
Nckap1P28660 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.38□□□□□ -0.43
Nckap1P28660 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms