Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Gm43474-201ENSMUST00000196415 774 ntBASIC12.93□□□□□ -0.34
H2afxP27661 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.93□□□□□ -0.34
H2afxP27661 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.93□□□□□ -0.34
H2afxP27661 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afxP27661 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afxP27661 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afxP27661 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.93□□□□□ -0.34
H2afxP27661 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afxP27661 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afxP27661 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.93□□□□□ -0.34
H2afxP27661 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.93□□□□□ -0.34
H2afxP27661 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.93□□□□□ -0.34
H2afxP27661 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afxP27661 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.93□□□□□ -0.34
H2afxP27661 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.93□□□□□ -0.34
H2afxP27661 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afxP27661 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afxP27661 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.93□□□□□ -0.34
H2afxP27661 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afxP27661 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afxP27661 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afxP27661 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
H2afxP27661 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.93□□□□□ -0.34
H2afxP27661 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
H2afxP27661 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afxP27661 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afxP27661 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
H2afxP27661 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.92□□□□□ -0.34
H2afxP27661 Gm24158-201ENSMUST00000175263 71 ntBASIC12.92□□□□□ -0.34
H2afxP27661 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.92□□□□□ -0.34
H2afxP27661 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.92□□□□□ -0.34
H2afxP27661 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.92□□□□□ -0.34
H2afxP27661 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
H2afxP27661 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
H2afxP27661 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.92□□□□□ -0.34
H2afxP27661 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afxP27661 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
H2afxP27661 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
H2afxP27661 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.91□□□□□ -0.34
H2afxP27661 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.91□□□□□ -0.34
H2afxP27661 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
H2afxP27661 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.91□□□□□ -0.34
H2afxP27661 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
H2afxP27661 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
H2afxP27661 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.91□□□□□ -0.34
H2afxP27661 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.91□□□□□ -0.34
H2afxP27661 Gm8410-201ENSMUST00000117225 605 ntBASIC12.91□□□□□ -0.34
H2afxP27661 Gm11439-201ENSMUST00000118598 409 ntBASIC12.91□□□□□ -0.34
H2afxP27661 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.91□□□□□ -0.34
H2afxP27661 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Gm25144-201ENSMUST00000179561 110 ntBASIC12.91□□□□□ -0.34
H2afxP27661 Gm25352-201ENSMUST00000179815 110 ntBASIC12.91□□□□□ -0.34
H2afxP27661 Gm4034-201ENSMUST00000187674 480 ntBASIC12.91□□□□□ -0.34
H2afxP27661 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.91□□□□□ -0.34
H2afxP27661 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.91□□□□□ -0.34
H2afxP27661 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
H2afxP27661 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.91□□□□□ -0.34
H2afxP27661 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms