Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Gm1335-201ENSMUST00000121653 386 ntBASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Gm16296-201ENSMUST00000159905 325 ntBASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Gm7029-201ENSMUST00000173226 450 ntBASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Gm26927-201ENSMUST00000182385 965 ntBASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Gm44124-201ENSMUST00000204159 472 ntBASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Gm5904-201ENSMUST00000210286 865 ntBASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Gm32025-201ENSMUST00000217960 307 ntBASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Gm25857-201ENSMUST00000082788 129 ntBASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfrsf1aP25118 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Matn2-203ENSMUST00000226766 3252 ntBASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Gm15824-201ENSMUST00000119516 955 ntBASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Gm15703-201ENSMUST00000120250 880 ntBASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfrsf1aP25118 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tnfrsf1aP25118 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tnfrsf1aP25118 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tnfrsf1aP25118 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Tnfrsf1aP25118 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.4□□□□□ -0.75
Tnfrsf1aP25118 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tnfrsf1aP25118 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Tnfrsf1aP25118 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tnfrsf1aP25118 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Tnfrsf1aP25118 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.39□□□□□ -0.75
Tnfrsf1aP25118 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1aP25118 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tnfrsf1aP25118 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1aP25118 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tnfrsf1aP25118 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1aP25118 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1aP25118 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1aP25118 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1aP25118 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1aP25118 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1aP25118 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1aP25118 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1aP25118 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tnfrsf1aP25118 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1aP25118 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf1aP25118 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms