Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.95□□□□□ -0.5
BdnfP21237 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
BdnfP21237 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.94□□□□□ -0.5
BdnfP21237 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Gm8213-201ENSMUST00000118191 441 ntBASIC11.94□□□□□ -0.5
BdnfP21237 Gm12203-201ENSMUST00000118235 598 ntBASIC11.94□□□□□ -0.5
BdnfP21237 Gm12209-201ENSMUST00000120089 596 ntBASIC11.94□□□□□ -0.5
BdnfP21237 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.94□□□□□ -0.5
BdnfP21237 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.94□□□□□ -0.5
BdnfP21237 Gm8652-201ENSMUST00000181363 964 ntBASIC11.94□□□□□ -0.5
BdnfP21237 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.94□□□□□ -0.5
BdnfP21237 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
BdnfP21237 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.94□□□□□ -0.5
BdnfP21237 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Gm5356-201ENSMUST00000093326 615 ntBASIC11.94□□□□□ -0.5
BdnfP21237 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.94□□□□□ -0.5
BdnfP21237 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.94□□□□□ -0.5
BdnfP21237 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
BdnfP21237 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
BdnfP21237 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.94□□□□□ -0.5
BdnfP21237 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
BdnfP21237 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.93□□□□□ -0.5
BdnfP21237 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.93□□□□□ -0.5
BdnfP21237 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.93□□□□□ -0.5
BdnfP21237 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.93□□□□□ -0.5
BdnfP21237 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Gm16479-201ENSMUST00000121706 932 ntBASIC11.93□□□□□ -0.5
BdnfP21237 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
BdnfP21237 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.93□□□□□ -0.5
BdnfP21237 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.93□□□□□ -0.5
BdnfP21237 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.93□□□□□ -0.5
BdnfP21237 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.93□□□□□ -0.5
BdnfP21237 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
BdnfP21237 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.93□□□□□ -0.5
BdnfP21237 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
BdnfP21237 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
BdnfP21237 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms