Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
TP20293 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TP20293 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.73□□□□□ -0.53
TP20293 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TP20293 Gm38092-201ENSMUST00000195600 653 ntBASIC11.73□□□□□ -0.53
TP20293 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TP20293 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.73□□□□□ -0.53
TP20293 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TP20293 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.73□□□□□ -0.53
TP20293 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TP20293 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TP20293 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TP20293 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TP20293 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TP20293 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
TP20293 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TP20293 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TP20293 Gm24526-201ENSMUST00000082921 158 ntBASIC11.73□□□□□ -0.53
TP20293 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TP20293 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TP20293 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TP20293 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
TP20293 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TP20293 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TP20293 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TP20293 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TP20293 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
TP20293 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
TP20293 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
TP20293 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
TP20293 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.72□□□□□ -0.53
TP20293 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
TP20293 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
TP20293 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Gm12957-201ENSMUST00000117835 377 ntBASIC11.72□□□□□ -0.53
TP20293 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.72□□□□□ -0.53
TP20293 Gm7809-201ENSMUST00000153199 742 ntBASIC11.72□□□□□ -0.53
TP20293 Gm16296-201ENSMUST00000159905 325 ntBASIC11.72□□□□□ -0.53
TP20293 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.72□□□□□ -0.53
TP20293 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.72□□□□□ -0.53
TP20293 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
TP20293 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
TP20293 Gm3890-201ENSMUST00000182416 207 ntBASIC11.72□□□□□ -0.53
TP20293 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.72□□□□□ -0.53
TP20293 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.72□□□□□ -0.53
TP20293 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.72□□□□□ -0.53
TP20293 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.72□□□□□ -0.53
TP20293 Gm19309-201ENSMUST00000218295 205 ntBASIC11.72□□□□□ -0.53
TP20293 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.72□□□□□ -0.53
TP20293 Gm5781-201ENSMUST00000219792 443 ntBASIC11.72□□□□□ -0.53
TP20293 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.72□□□□□ -0.53
TP20293 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
TP20293 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.72□□□□□ -0.53
TP20293 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
TP20293 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.72□□□□□ -0.53
TP20293 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.72□□□□□ -0.53
TP20293 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.72□□□□□ -0.53
TP20293 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
TP20293 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TP20293 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TP20293 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
TP20293 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TP20293 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
TP20293 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
TP20293 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TP20293 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TP20293 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.71□□□□□ -0.53
TP20293 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TP20293 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TP20293 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TP20293 Gm22018-201ENSMUST00000104357 131 ntBASIC11.71□□□□□ -0.53
TP20293 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TP20293 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TP20293 Gm12742-201ENSMUST00000117326 410 ntBASIC11.71□□□□□ -0.53
TP20293 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms