Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
TpbpaP13438 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
TpbpaP13438 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Gm5866-201ENSMUST00000177881 973 ntBASIC11.24□□□□□ -0.61
TpbpaP13438 Gm9630-201ENSMUST00000178304 885 ntBASIC11.24□□□□□ -0.61
TpbpaP13438 Gm27437-201ENSMUST00000183429 107 ntBASIC11.24□□□□□ -0.61
TpbpaP13438 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Gm19184-201ENSMUST00000196798 928 ntBASIC11.24□□□□□ -0.61
TpbpaP13438 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.24□□□□□ -0.61
TpbpaP13438 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.24□□□□□ -0.61
TpbpaP13438 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Gm26035-201ENSMUST00000083065 308 ntBASIC11.24□□□□□ -0.61
TpbpaP13438 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
TpbpaP13438 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.24□□□□□ -0.61
TpbpaP13438 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.24□□□□□ -0.61
TpbpaP13438 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
TpbpaP13438 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
TpbpaP13438 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
TpbpaP13438 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TpbpaP13438 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
TpbpaP13438 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
TpbpaP13438 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.24□□□□□ -0.61
TpbpaP13438 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
TpbpaP13438 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.23□□□□□ -0.61
TpbpaP13438 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.23□□□□□ -0.61
TpbpaP13438 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
TpbpaP13438 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
TpbpaP13438 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.23□□□□□ -0.61
TpbpaP13438 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Gm14921-201ENSMUST00000118643 908 ntBASIC11.23□□□□□ -0.61
TpbpaP13438 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.23□□□□□ -0.61
TpbpaP13438 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.23□□□□□ -0.61
TpbpaP13438 Gm12091-201ENSMUST00000146791 830 ntBASIC11.23□□□□□ -0.61
TpbpaP13438 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.23□□□□□ -0.61
TpbpaP13438 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.23□□□□□ -0.61
TpbpaP13438 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.23□□□□□ -0.61
TpbpaP13438 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.23□□□□□ -0.61
TpbpaP13438 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
TpbpaP13438 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.23□□□□□ -0.61
TpbpaP13438 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TpbpaP13438 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
TpbpaP13438 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TpbpaP13438 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
TpbpaP13438 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TpbpaP13438 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TpbpaP13438 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TpbpaP13438 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TpbpaP13438 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.22□□□□□ -0.61
TpbpaP13438 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TpbpaP13438 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.22□□□□□ -0.61
TpbpaP13438 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
TpbpaP13438 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms