Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cntn1P12960 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cntn1P12960 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cntn1P12960 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.92□□□□□ -0.5
Cntn1P12960 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.92□□□□□ -0.5
Cntn1P12960 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.92□□□□□ -0.5
Cntn1P12960 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.92□□□□□ -0.5
Cntn1P12960 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Gm24231-201ENSMUST00000104315 133 ntBASIC11.92□□□□□ -0.5
Cntn1P12960 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cntn1P12960 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.92□□□□□ -0.5
Cntn1P12960 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.92□□□□□ -0.5
Cntn1P12960 Gm9022-201ENSMUST00000182482 992 ntBASIC11.92□□□□□ -0.5
Cntn1P12960 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.92□□□□□ -0.5
Cntn1P12960 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.92□□□□□ -0.5
Cntn1P12960 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cntn1P12960 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Gm10312-201ENSMUST00000078515 489 ntBASIC11.92□□□□□ -0.5
Cntn1P12960 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.92□□□□□ -0.5
Cntn1P12960 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cntn1P12960 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.92□□□□□ -0.5
Cntn1P12960 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cntn1P12960 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.91□□□□□ -0.5
Cntn1P12960 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cntn1P12960 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.91□□□□□ -0.5
Cntn1P12960 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cntn1P12960 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.91□□□□□ -0.5
Cntn1P12960 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Cntn1P12960 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Cntn1P12960 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.91□□□□□ -0.5
Cntn1P12960 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.91□□□□□ -0.5
Cntn1P12960 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.91□□□□□ -0.5
Cntn1P12960 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.91□□□□□ -0.5
Cntn1P12960 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.91□□□□□ -0.5
Cntn1P12960 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.91□□□□□ -0.5
Cntn1P12960 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.91□□□□□ -0.5
Cntn1P12960 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cntn1P12960 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.91□□□□□ -0.5
Cntn1P12960 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms