Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
UbbP0CG49 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
UbbP0CG49 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.82□□□□□ -0.68
UbbP0CG49 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.81□□□□□ -0.68
UbbP0CG49 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
UbbP0CG49 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.81□□□□□ -0.68
UbbP0CG49 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
UbbP0CG49 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
UbbP0CG49 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Gm8213-201ENSMUST00000118191 441 ntBASIC10.81□□□□□ -0.68
UbbP0CG49 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.81□□□□□ -0.68
UbbP0CG49 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
UbbP0CG49 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Gm22121-201ENSMUST00000175148 54 ntBASIC10.81□□□□□ -0.68
UbbP0CG49 Gm2495-201ENSMUST00000191160 466 ntBASIC10.81□□□□□ -0.68
UbbP0CG49 Gm35960-201ENSMUST00000202712 767 ntBASIC10.81□□□□□ -0.68
UbbP0CG49 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.81□□□□□ -0.68
UbbP0CG49 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.81□□□□□ -0.68
UbbP0CG49 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.81□□□□□ -0.68
UbbP0CG49 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.81□□□□□ -0.68
UbbP0CG49 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.81□□□□□ -0.68
UbbP0CG49 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Gm15823-201ENSMUST00000064305 670 ntBASIC10.81□□□□□ -0.68
UbbP0CG49 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC10.81□□□□□ -0.68
UbbP0CG49 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.81□□□□□ -0.68
UbbP0CG49 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.81□□□□□ -0.68
UbbP0CG49 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UbbP0CG49 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
UbbP0CG49 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
UbbP0CG49 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.8□□□□□ -0.68
UbbP0CG49 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.8□□□□□ -0.68
UbbP0CG49 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Gm37922-201ENSMUST00000195596 455 ntBASIC10.8□□□□□ -0.68
UbbP0CG49 Gm38671-201ENSMUST00000200573 130 ntBASIC10.8□□□□□ -0.68
UbbP0CG49 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.8□□□□□ -0.68
UbbP0CG49 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.8□□□□□ -0.68
UbbP0CG49 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.8□□□□□ -0.68
UbbP0CG49 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
UbbP0CG49 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
UbbP0CG49 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
UbbP0CG49 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.8□□□□□ -0.68
UbbP0CG49 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.8□□□□□ -0.68
UbbP0CG49 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UbbP0CG49 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
UbbP0CG49 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.8□□□□□ -0.68
UbbP0CG49 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms