Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hoxd3P09027 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC9.85□□□□□ -0.83
Hoxd3P09027 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hoxd3P09027 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hoxd3P09027 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Hoxd3P09027 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hoxd3P09027 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
Hoxd3P09027 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Hoxd3P09027 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
Hoxd3P09027 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC9.84□□□□□ -0.83
Hoxd3P09027 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Hoxd3P09027 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Gm44094-201ENSMUST00000204703 2030 ntBASIC9.84□□□□□ -0.83
Hoxd3P09027 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Dcpp3-201ENSMUST00000115428 610 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Hoxd3P09027 Gm16044-201ENSMUST00000118475 450 ntBASIC9.84□□□□□ -0.83
Hoxd3P09027 Gm11222-201ENSMUST00000119005 738 ntBASIC9.84□□□□□ -0.83
Hoxd3P09027 Gm15225-201ENSMUST00000120449 1017 ntBASIC9.84□□□□□ -0.83
Hoxd3P09027 Gm11964-201ENSMUST00000120982 444 ntBASIC9.84□□□□□ -0.83
Hoxd3P09027 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC9.84□□□□□ -0.83
Hoxd3P09027 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC9.84□□□□□ -0.83
Hoxd3P09027 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC9.84□□□□□ -0.83
Hoxd3P09027 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC9.84□□□□□ -0.83
Hoxd3P09027 Gm38384-201ENSMUST00000195413 1122 ntBASIC9.84□□□□□ -0.83
Hoxd3P09027 Gm38092-201ENSMUST00000195600 653 ntBASIC9.84□□□□□ -0.83
Hoxd3P09027 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Hoxd3P09027 Gm22005-201ENSMUST00000082795 141 ntBASIC9.84□□□□□ -0.83
Hoxd3P09027 Gm22058-201ENSMUST00000083393 310 ntBASIC9.84□□□□□ -0.83
Hoxd3P09027 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Hoxd3P09027 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
Hoxd3P09027 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Hoxd3P09027 AC137842.1-201ENSMUST00000227896 2064 ntBASIC9.84□□□□□ -0.83
Hoxd3P09027 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hoxd3P09027 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hoxd3P09027 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Hoxd3P09027 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hoxd3P09027 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hoxd3P09027 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hoxd3P09027 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hoxd3P09027 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Hoxd3P09027 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Hoxd3P09027 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Hoxd3P09027 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Hoxd3P09027 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hoxd3P09027 AC117194.1-201ENSMUST00000224847 3002 ntBASIC9.83□□□□□ -0.84
Hoxd3P09027 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hoxd3P09027 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hoxd3P09027 Gm37827-201ENSMUST00000194486 1542 ntBASIC9.83□□□□□ -0.84
Hoxd3P09027 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC9.83□□□□□ -0.84
Hoxd3P09027 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hoxd3P09027 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hoxd3P09027 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hoxd3P09027 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hoxd3P09027 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Hoxd3P09027 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hoxd3P09027 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hoxd3P09027 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Hoxd3P09027 Gm12656-201ENSMUST00000118149 577 ntBASIC9.83□□□□□ -0.84
Hoxd3P09027 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hoxd3P09027 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hoxd3P09027 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC9.83□□□□□ -0.84
Hoxd3P09027 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC9.83□□□□□ -0.84
Hoxd3P09027 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hoxd3P09027 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hoxd3P09027 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Hoxd3P09027 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hoxd3P09027 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Hoxd3P09027 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hoxd3P09027 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC9.83□□□□□ -0.84
Hoxd3P09027 Gm27243-201ENSMUST00000183964 521 ntBASIC9.83□□□□□ -0.84
Hoxd3P09027 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC9.83□□□□□ -0.84
Hoxd3P09027 Gm27320-201ENSMUST00000184892 109 ntBASIC9.83□□□□□ -0.84
Hoxd3P09027 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC9.83□□□□□ -0.84
Hoxd3P09027 Gm18717-201ENSMUST00000192744 1241 ntBASIC9.83□□□□□ -0.84
Hoxd3P09027 Gm20177-201ENSMUST00000203705 334 ntBASIC9.83□□□□□ -0.84
Hoxd3P09027 Gm45399-201ENSMUST00000209955 1016 ntBASIC9.83□□□□□ -0.84
Hoxd3P09027 Gm21769-201ENSMUST00000211922 111 ntBASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms