Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.09□□□□□ -0.63
P06344 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
P06344 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.63
P06344 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
P06344 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
P06344 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
P06344 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
P06344 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
P06344 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.08□□□□□ -0.64
P06344 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
P06344 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Gm12314-201ENSMUST00000118104 538 ntBASIC11.08□□□□□ -0.64
P06344 Gm15547-201ENSMUST00000122152 333 ntBASIC11.08□□□□□ -0.64
P06344 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.08□□□□□ -0.64
P06344 Gm25668-201ENSMUST00000157700 129 ntBASIC11.08□□□□□ -0.64
P06344 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.08□□□□□ -0.64
P06344 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.08□□□□□ -0.64
P06344 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.08□□□□□ -0.64
P06344 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.08□□□□□ -0.64
P06344 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
P06344 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.08□□□□□ -0.64
P06344 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.08□□□□□ -0.64
P06344 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
P06344 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P06344 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
P06344 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
P06344 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
P06344 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.07□□□□□ -0.64
P06344 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Gm11930-201ENSMUST00000117788 190 ntBASIC11.07□□□□□ -0.64
P06344 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Gm4857-201ENSMUST00000192718 785 ntBASIC11.07□□□□□ -0.64
P06344 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.07□□□□□ -0.64
P06344 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.07□□□□□ -0.64
P06344 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.07□□□□□ -0.64
P06344 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.07□□□□□ -0.64
P06344 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P06344 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms