Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PrnpP04925 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PrnpP04925 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PrnpP04925 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrnpP04925 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrnpP04925 Gm12857-201ENSMUST00000117678 592 ntBASIC12.84□□□□□ -0.35
PrnpP04925 Gm12208-201ENSMUST00000122004 163 ntBASIC12.84□□□□□ -0.35
PrnpP04925 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.84□□□□□ -0.35
PrnpP04925 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.84□□□□□ -0.35
PrnpP04925 Rprl1-201ENSMUST00000158050 327 ntBASIC12.84□□□□□ -0.35
PrnpP04925 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.84□□□□□ -0.35
PrnpP04925 Gm44551-201ENSMUST00000208804 171 ntBASIC12.84□□□□□ -0.35
PrnpP04925 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrnpP04925 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
PrnpP04925 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrnpP04925 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrnpP04925 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
PrnpP04925 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
PrnpP04925 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
PrnpP04925 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.84□□□□□ -0.35
PrnpP04925 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrnpP04925 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrnpP04925 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.84□□□□□ -0.35
PrnpP04925 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrnpP04925 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.84□□□□□ -0.35
PrnpP04925 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PrnpP04925 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PrnpP04925 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrnpP04925 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrnpP04925 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrnpP04925 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrnpP04925 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrnpP04925 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
PrnpP04925 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
PrnpP04925 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
PrnpP04925 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.83□□□□□ -0.35
PrnpP04925 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.35
PrnpP04925 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
PrnpP04925 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
PrnpP04925 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrnpP04925 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PrnpP04925 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
PrnpP04925 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrnpP04925 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.83□□□□□ -0.36
PrnpP04925 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrnpP04925 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
PrnpP04925 Gm26286-201ENSMUST00000104166 134 ntBASIC12.83□□□□□ -0.36
PrnpP04925 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
PrnpP04925 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
PrnpP04925 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
PrnpP04925 Gm7722-201ENSMUST00000120646 741 ntBASIC12.83□□□□□ -0.36
PrnpP04925 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PrnpP04925 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PrnpP04925 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.83□□□□□ -0.36
PrnpP04925 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.83□□□□□ -0.36
PrnpP04925 Gm4607-201ENSMUST00000206649 577 ntBASIC12.83□□□□□ -0.36
PrnpP04925 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
PrnpP04925 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
PrnpP04925 Gm10288-201ENSMUST00000084614 537 ntBASIC12.83□□□□□ -0.36
PrnpP04925 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrnpP04925 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrnpP04925 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PrnpP04925 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrnpP04925 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PrnpP04925 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrnpP04925 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrnpP04925 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PrnpP04925 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.83□□□□□ -0.36
PrnpP04925 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrnpP04925 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrnpP04925 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrnpP04925 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PrnpP04925 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PrnpP04925 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PrnpP04925 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PrnpP04925 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PrnpP04925 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PrnpP04925 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
PrnpP04925 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
PrnpP04925 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PrnpP04925 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PrnpP04925 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PrnpP04925 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.82□□□□□ -0.36
PrnpP04925 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PrnpP04925 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PrnpP04925 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PrnpP04925 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PrnpP04925 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PrnpP04925 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PrnpP04925 Gm23912-201ENSMUST00000104687 87 ntBASIC12.82□□□□□ -0.36
PrnpP04925 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
PrnpP04925 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
PrnpP04925 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.82□□□□□ -0.36
PrnpP04925 Gm11667-201ENSMUST00000119828 486 ntBASIC12.82□□□□□ -0.36
PrnpP04925 Gm12029-201ENSMUST00000120073 832 ntBASIC12.82□□□□□ -0.36
PrnpP04925 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.82□□□□□ -0.36
PrnpP04925 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
PrnpP04925 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PrnpP04925 Gm17391-201ENSMUST00000171036 126 ntBASIC12.82□□□□□ -0.36
PrnpP04925 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms