Protein–RNA interactions for Protein: O89109

Kcnn4, Intermediate conductance calcium-activated potassium channel protein 4, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnn4O89109 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnn4O89109 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnn4O89109 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnn4O89109 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnn4O89109 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.28□□□□□ -0.44
Kcnn4O89109 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.28□□□□□ -0.44
Kcnn4O89109 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.28□□□□□ -0.44
Kcnn4O89109 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Kcnn4O89109 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Kcnn4O89109 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Kcnn4O89109 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Kcnn4O89109 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Kcnn4O89109 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Kcnn4O89109 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Kcnn4O89109 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Kcnn4O89109 Gm2991-201ENSMUST00000173338 480 ntBASIC12.28□□□□□ -0.44
Kcnn4O89109 Gm27243-201ENSMUST00000183964 521 ntBASIC12.28□□□□□ -0.44
Kcnn4O89109 Mir8109-201ENSMUST00000184375 117 ntBASIC12.28□□□□□ -0.44
Kcnn4O89109 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.28□□□□□ -0.44
Kcnn4O89109 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.28□□□□□ -0.44
Kcnn4O89109 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.28□□□□□ -0.44
Kcnn4O89109 Gm39404-201ENSMUST00000216350 313 ntBASIC12.28□□□□□ -0.44
Kcnn4O89109 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.28□□□□□ -0.44
Kcnn4O89109 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Gm10076-201ENSMUST00000073238 384 ntBASIC12.28□□□□□ -0.44
Kcnn4O89109 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.28□□□□□ -0.44
Kcnn4O89109 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnn4O89109 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Kcnn4O89109 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.28□□□□□ -0.44
Kcnn4O89109 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Kcnn4O89109 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Kcnn4O89109 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Kcnn4O89109 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Kcnn4O89109 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Kcnn4O89109 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.27□□□□□ -0.45
Kcnn4O89109 Gm14999-201ENSMUST00000121039 624 ntBASIC12.27□□□□□ -0.45
Kcnn4O89109 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.27□□□□□ -0.45
Kcnn4O89109 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.27□□□□□ -0.45
Kcnn4O89109 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.27□□□□□ -0.45
Kcnn4O89109 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.27□□□□□ -0.45
Kcnn4O89109 Gm38266-201ENSMUST00000194931 421 ntBASIC12.27□□□□□ -0.45
Kcnn4O89109 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.27□□□□□ -0.45
Kcnn4O89109 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.27□□□□□ -0.45
Kcnn4O89109 Gm45331-201ENSMUST00000209868 554 ntBASIC12.27□□□□□ -0.45
Kcnn4O89109 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.27□□□□□ -0.45
Kcnn4O89109 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Kcnn4O89109 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.27□□□□□ -0.45
Kcnn4O89109 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Kcnn4O89109 Olfr582-201ENSMUST00000098212 960 ntBASIC12.27□□□□□ -0.45
Kcnn4O89109 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Kcnn4O89109 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms