Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CopeO89079 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.79□□□□□ -0.36
CopeO89079 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.79□□□□□ -0.36
CopeO89079 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CopeO89079 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CopeO89079 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.79□□□□□ -0.36
CopeO89079 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CopeO89079 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.79□□□□□ -0.36
CopeO89079 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Gm13369-201ENSMUST00000119442 987 ntBASIC12.79□□□□□ -0.36
CopeO89079 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CopeO89079 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CopeO89079 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.79□□□□□ -0.36
CopeO89079 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.79□□□□□ -0.36
CopeO89079 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
CopeO89079 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.79□□□□□ -0.36
CopeO89079 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.79□□□□□ -0.36
CopeO89079 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CopeO89079 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.79□□□□□ -0.36
CopeO89079 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.79□□□□□ -0.36
CopeO89079 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.79□□□□□ -0.36
CopeO89079 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CopeO89079 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopeO89079 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.79□□□□□ -0.36
CopeO89079 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CopeO89079 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CopeO89079 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.78□□□□□ -0.36
CopeO89079 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.78□□□□□ -0.36
CopeO89079 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Gm8810-201ENSMUST00000172895 754 ntBASIC12.78□□□□□ -0.36
CopeO89079 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.78□□□□□ -0.36
CopeO89079 Mir6977-201ENSMUST00000184960 64 ntBASIC12.78□□□□□ -0.36
CopeO89079 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.78□□□□□ -0.36
CopeO89079 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.78□□□□□ -0.36
CopeO89079 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.78□□□□□ -0.36
CopeO89079 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.78□□□□□ -0.36
CopeO89079 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Gm2423-201ENSMUST00000074863 733 ntBASIC12.78□□□□□ -0.36
CopeO89079 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CopeO89079 Gm24526-201ENSMUST00000082921 158 ntBASIC12.78□□□□□ -0.36
CopeO89079 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.78□□□□□ -0.36
CopeO89079 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
CopeO89079 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopeO89079 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.77□□□□□ -0.36
CopeO89079 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CopeO89079 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
CopeO89079 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CopeO89079 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.77□□□□□ -0.36
CopeO89079 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CopeO89079 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
CopeO89079 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CopeO89079 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CopeO89079 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CopeO89079 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms