Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.92□□□□□ -0.5
Hcn1O88704 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Gm22018-201ENSMUST00000104357 131 ntBASIC11.92□□□□□ -0.5
Hcn1O88704 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.92□□□□□ -0.5
Hcn1O88704 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Mir1938-201ENSMUST00000158746 100 ntBASIC11.92□□□□□ -0.5
Hcn1O88704 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Hcn1O88704 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Hcn1O88704 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Gm19184-201ENSMUST00000196798 928 ntBASIC11.92□□□□□ -0.5
Hcn1O88704 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.92□□□□□ -0.5
Hcn1O88704 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.92□□□□□ -0.5
Hcn1O88704 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Hcn1O88704 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.92□□□□□ -0.5
Hcn1O88704 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Hcn1O88704 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Hcn1O88704 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.92□□□□□ -0.5
Hcn1O88704 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.92□□□□□ -0.5
Hcn1O88704 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Hcn1O88704 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Hcn1O88704 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.91□□□□□ -0.5
Hcn1O88704 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.91□□□□□ -0.5
Hcn1O88704 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Gm25261-201ENSMUST00000157416 134 ntBASIC11.91□□□□□ -0.5
Hcn1O88704 Gm16379-201ENSMUST00000161469 348 ntBASIC11.91□□□□□ -0.5
Hcn1O88704 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.91□□□□□ -0.5
Hcn1O88704 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.91□□□□□ -0.5
Hcn1O88704 Gm22121-201ENSMUST00000175148 54 ntBASIC11.91□□□□□ -0.5
Hcn1O88704 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Hcn1O88704 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Hcn1O88704 Gm6222-202ENSMUST00000182143 629 ntBASIC11.91□□□□□ -0.5
Hcn1O88704 Gm8762-201ENSMUST00000193486 339 ntBASIC11.91□□□□□ -0.5
Hcn1O88704 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.91□□□□□ -0.5
Hcn1O88704 Gm42693-201ENSMUST00000196779 631 ntBASIC11.91□□□□□ -0.5
Hcn1O88704 Gm44124-201ENSMUST00000204159 472 ntBASIC11.91□□□□□ -0.5
Hcn1O88704 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.91□□□□□ -0.5
Hcn1O88704 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Hcn1O88704 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.91□□□□□ -0.5
Hcn1O88704 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Hcn1O88704 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.91□□□□□ -0.5
Hcn1O88704 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.91□□□□□ -0.5
Hcn1O88704 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.91□□□□□ -0.5
Hcn1O88704 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hcn1O88704 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.9□□□□□ -0.5
Hcn1O88704 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Hcn1O88704 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Hcn1O88704 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.9□□□□□ -0.5
Hcn1O88704 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms