Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Copb2O55029 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Copb2O55029 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Copb2O55029 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.28□□□□□ -0.12
Copb2O55029 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Copb2O55029 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Copb2O55029 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.28□□□□□ -0.12
Copb2O55029 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.28□□□□□ -0.12
Copb2O55029 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.28□□□□□ -0.12
Copb2O55029 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Copb2O55029 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Copb2O55029 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Copb2O55029 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Copb2O55029 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Copb2O55029 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Copb2O55029 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Copb2O55029 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Copb2O55029 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Copb2O55029 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Copb2O55029 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Copb2O55029 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Copb2O55029 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Copb2O55029 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Copb2O55029 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Copb2O55029 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Copb2O55029 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Copb2O55029 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.27□□□□□ -0.12
Copb2O55029 Gm40377-201ENSMUST00000204604 2015 ntBASIC14.27□□□□□ -0.12
Copb2O55029 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Copb2O55029 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Copb2O55029 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Copb2O55029 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Copb2O55029 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Copb2O55029 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.27□□□□□ -0.12
Copb2O55029 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.27□□□□□ -0.12
Copb2O55029 Gm23200-201ENSMUST00000104379 132 ntBASIC14.27□□□□□ -0.13
Copb2O55029 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Copb2O55029 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Copb2O55029 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Copb2O55029 Gm14644-201ENSMUST00000116671 647 ntBASIC14.27□□□□□ -0.13
Copb2O55029 Gm7857-201ENSMUST00000117957 358 ntBASIC14.27□□□□□ -0.13
Copb2O55029 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Copb2O55029 Gm4909-201ENSMUST00000118749 794 ntBASIC14.27□□□□□ -0.13
Copb2O55029 Gm9083-201ENSMUST00000120423 819 ntBASIC14.27□□□□□ -0.13
Copb2O55029 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Copb2O55029 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.27□□□□□ -0.13
Copb2O55029 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Copb2O55029 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Copb2O55029 Gm17812-201ENSMUST00000204935 318 ntBASIC14.27□□□□□ -0.13
Copb2O55029 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.27□□□□□ -0.13
Copb2O55029 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Copb2O55029 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.27□□□□□ -0.13
Copb2O55029 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Copb2O55029 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Copb2O55029 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Copb2O55029 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Copb2O55029 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Copb2O55029 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Copb2O55029 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Copb2O55029 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Copb2O55029 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Copb2O55029 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Copb2O55029 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Copb2O55029 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Copb2O55029 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Copb2O55029 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Copb2O55029 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Copb2O55029 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Copb2O55029 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.26□□□□□ -0.13
Copb2O55029 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Copb2O55029 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Copb2O55029 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Copb2O55029 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.26□□□□□ -0.13
Copb2O55029 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.26□□□□□ -0.13
Copb2O55029 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Copb2O55029 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Copb2O55029 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Copb2O55029 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.26□□□□□ -0.13
Copb2O55029 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.26□□□□□ -0.13
Copb2O55029 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Copb2O55029 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.26□□□□□ -0.13
Copb2O55029 Mir5120-201ENSMUST00000175020 78 ntBASIC14.26□□□□□ -0.13
Copb2O55029 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Copb2O55029 Mir6979-201ENSMUST00000183927 56 ntBASIC14.26□□□□□ -0.13
Copb2O55029 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.26□□□□□ -0.13
Copb2O55029 Gm18041-201ENSMUST00000218210 618 ntBASIC14.26□□□□□ -0.13
Copb2O55029 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.26□□□□□ -0.13
Copb2O55029 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Copb2O55029 Gm9996-201ENSMUST00000070359 913 ntBASIC14.26□□□□□ -0.13
Copb2O55029 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Copb2O55029 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Copb2O55029 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Copb2O55029 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Copb2O55029 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Copb2O55029 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Copb2O55029 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Copb2O55029 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Copb2O55029 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Copb2O55029 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Copb2O55029 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms