Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
BckdkO55028 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
BckdkO55028 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.55□□□□□ -0.56
BckdkO55028 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
BckdkO55028 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
BckdkO55028 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
BckdkO55028 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
BckdkO55028 Paupar-201ENSMUST00000194826 3482 ntBASIC11.55□□□□□ -0.56
BckdkO55028 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
BckdkO55028 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
BckdkO55028 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
BckdkO55028 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
BckdkO55028 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
BckdkO55028 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
BckdkO55028 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
BckdkO55028 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.54□□□□□ -0.56
BckdkO55028 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
BckdkO55028 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.54□□□□□ -0.56
BckdkO55028 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.54□□□□□ -0.56
BckdkO55028 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.54□□□□□ -0.56
BckdkO55028 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.54□□□□□ -0.56
BckdkO55028 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
BckdkO55028 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
BckdkO55028 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.54□□□□□ -0.56
BckdkO55028 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.54□□□□□ -0.56
BckdkO55028 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Gm8099-201ENSMUST00000200510 742 ntBASIC11.54□□□□□ -0.56
BckdkO55028 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
BckdkO55028 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.54□□□□□ -0.56
BckdkO55028 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.54□□□□□ -0.56
BckdkO55028 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.54□□□□□ -0.56
BckdkO55028 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.54□□□□□ -0.56
BckdkO55028 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
BckdkO55028 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.54□□□□□ -0.56
BckdkO55028 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
BckdkO55028 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
BckdkO55028 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.53□□□□□ -0.56
BckdkO55028 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
BckdkO55028 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
BckdkO55028 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
BckdkO55028 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
BckdkO55028 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BckdkO55028 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BckdkO55028 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BckdkO55028 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BckdkO55028 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BckdkO55028 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BckdkO55028 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BckdkO55028 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.53□□□□□ -0.56
BckdkO55028 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
BckdkO55028 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BckdkO55028 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BckdkO55028 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.53□□□□□ -0.56
BckdkO55028 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
BckdkO55028 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BckdkO55028 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BckdkO55028 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
BckdkO55028 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BckdkO55028 Gm11222-201ENSMUST00000119005 738 ntBASIC11.53□□□□□ -0.56
BckdkO55028 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BckdkO55028 Gm26083-201ENSMUST00000157904 193 ntBASIC11.53□□□□□ -0.56
BckdkO55028 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BckdkO55028 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BckdkO55028 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BckdkO55028 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.53□□□□□ -0.56
BckdkO55028 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.53□□□□□ -0.56
BckdkO55028 Gm21769-201ENSMUST00000211922 111 ntBASIC11.53□□□□□ -0.56
BckdkO55028 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
BckdkO55028 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms