Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ebf3O08791 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ebf3O08791 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.94□□□□□ -0.34
Ebf3O08791 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.94□□□□□ -0.34
Ebf3O08791 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.94□□□□□ -0.34
Ebf3O08791 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.94□□□□□ -0.34
Ebf3O08791 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.94□□□□□ -0.34
Ebf3O08791 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Ebf3O08791 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Ebf3O08791 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ebf3O08791 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ebf3O08791 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.94□□□□□ -0.34
Ebf3O08791 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.94□□□□□ -0.34
Ebf3O08791 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Ebf3O08791 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.94□□□□□ -0.34
Ebf3O08791 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf3O08791 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.94□□□□□ -0.34
Ebf3O08791 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Ebf3O08791 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ebf3O08791 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.93□□□□□ -0.34
Ebf3O08791 Gm14921-201ENSMUST00000118643 908 ntBASIC12.93□□□□□ -0.34
Ebf3O08791 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.93□□□□□ -0.34
Ebf3O08791 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Gm8018-201ENSMUST00000173536 789 ntBASIC12.93□□□□□ -0.34
Ebf3O08791 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.93□□□□□ -0.34
Ebf3O08791 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.93□□□□□ -0.34
Ebf3O08791 Gm45224-201ENSMUST00000208203 414 ntBASIC12.93□□□□□ -0.34
Ebf3O08791 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.93□□□□□ -0.34
Ebf3O08791 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Ebf3O08791 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.93□□□□□ -0.34
Ebf3O08791 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.93□□□□□ -0.34
Ebf3O08791 Gm10312-201ENSMUST00000078515 489 ntBASIC12.93□□□□□ -0.34
Ebf3O08791 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.93□□□□□ -0.34
Ebf3O08791 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.93□□□□□ -0.34
Ebf3O08791 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Ebf3O08791 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf3O08791 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.92□□□□□ -0.34
Ebf3O08791 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.92□□□□□ -0.34
Ebf3O08791 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ebf3O08791 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.92□□□□□ -0.34
Ebf3O08791 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms