Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Dctn1O08788 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.3■□□□□ 0.04
Dctn1O08788 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC15.3■□□□□ 0.04
Dctn1O08788 Gm25881-201ENSMUST00000157783 103 ntBASIC15.3■□□□□ 0.04
Dctn1O08788 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Dctn1O08788 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Gm27530-201ENSMUST00000184096 98 ntBASIC15.3■□□□□ 0.04
Dctn1O08788 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC15.3■□□□□ 0.04
Dctn1O08788 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.3■□□□□ 0.04
Dctn1O08788 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Dctn1O08788 AC125486.1-201ENSMUST00000218701 320 ntBASIC15.3■□□□□ 0.04
Dctn1O08788 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Gm5455-201ENSMUST00000058710 715 ntBASIC15.3■□□□□ 0.04
Dctn1O08788 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Mir219a-1-201ENSMUST00000083621 110 ntBASIC15.3■□□□□ 0.04
Dctn1O08788 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Dctn1O08788 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Dctn1O08788 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dctn1O08788 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Dctn1O08788 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dctn1O08788 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Dctn1O08788 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
Dctn1O08788 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Dctn1O08788 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dctn1O08788 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dctn1O08788 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dctn1O08788 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dctn1O08788 Gm6580-201ENSMUST00000117504 1357 ntBASIC15.29■□□□□ 0.04
Dctn1O08788 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Dctn1O08788 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Dctn1O08788 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Dctn1O08788 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Dctn1O08788 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Dctn1O08788 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Dctn1O08788 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC15.29■□□□□ 0.04
Dctn1O08788 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC15.29■□□□□ 0.04
Dctn1O08788 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC15.29■□□□□ 0.04
Dctn1O08788 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC15.29■□□□□ 0.04
Dctn1O08788 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC15.29■□□□□ 0.04
Dctn1O08788 Gm1821-202ENSMUST00000227415 750 ntBASIC15.29■□□□□ 0.04
Dctn1O08788 Gm10371-202ENSMUST00000228010 1081 ntBASIC15.29■□□□□ 0.04
Dctn1O08788 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dctn1O08788 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dctn1O08788 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Dctn1O08788 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Dctn1O08788 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dctn1O08788 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dctn1O08788 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Dctn1O08788 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dctn1O08788 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Dctn1O08788 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Dctn1O08788 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Dctn1O08788 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dctn1O08788 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dctn1O08788 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dctn1O08788 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Dctn1O08788 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Dctn1O08788 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dctn1O08788 Gm7049-201ENSMUST00000223520 1712 ntBASIC15.29■□□□□ 0.04
Dctn1O08788 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dctn1O08788 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dctn1O08788 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dctn1O08788 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Dctn1O08788 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dctn1O08788 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dctn1O08788 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dctn1O08788 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dctn1O08788 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Dctn1O08788 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dctn1O08788 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Dctn1O08788 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Dctn1O08788 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC15.28■□□□□ 0.04
Dctn1O08788 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Dctn1O08788 Mir7677-201ENSMUST00000184226 67 ntBASIC15.28■□□□□ 0.04
Dctn1O08788 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC15.28■□□□□ 0.04
Dctn1O08788 Gm5733-201ENSMUST00000190232 939 ntBASIC15.28■□□□□ 0.04
Dctn1O08788 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Dctn1O08788 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC15.28■□□□□ 0.04
Dctn1O08788 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Dctn1O08788 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dctn1O08788 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dctn1O08788 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.28■□□□□ 0.04
Dctn1O08788 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Dctn1O08788 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms