Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Gm8815-201ENSMUST00000173809 620 ntBASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Gm23045-201ENSMUST00000175041 96 ntBASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Gm37905-201ENSMUST00000195310 341 ntBASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
B020004C17RikJ3QP07 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Gm14193-201ENSMUST00000105067 153 ntBASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Gm11451-201ENSMUST00000118946 630 ntBASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Gm12516-201ENSMUST00000120819 385 ntBASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Mir6958-201ENSMUST00000184207 73 ntBASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Gm27910-201ENSMUST00000185004 107 ntBASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Gm34023-201ENSMUST00000195539 217 ntBASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
B020004C17RikJ3QP07 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Gm37299-201ENSMUST00000193951 826 ntBASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
B020004C17RikJ3QP07 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms