Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 AC122408.1-201ENSMUST00000218949 218 ntBASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Snora73b-201ENSMUST00000083419 205 ntBASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Adra1a-206ENSMUST00000225182 2337 ntBASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Gm11836-201ENSMUST00000121022 441 ntBASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Gm44758-201ENSMUST00000206096 2068 ntBASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 AC091458.1-201ENSMUST00000220902 1361 ntBASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcf11G3X9Z4 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Rnf17-202ENSMUST00000223627 2077 ntBASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Gm23771-201ENSMUST00000178702 110 ntBASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Gm5852-201ENSMUST00000194119 1021 ntBASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Gm5542-201ENSMUST00000195485 1089 ntBASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcf11G3X9Z4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Gm22920-201ENSMUST00000102175 109 ntBASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Gm7666-201ENSMUST00000146631 819 ntBASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Pcf11G3X9Z4 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms