Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna9G3X8Z7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Gm13570-201ENSMUST00000140763 309 ntBASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna9G3X8Z7 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna9G3X8Z7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna9G3X8Z7 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms