Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Gm20392-201ENSMUST00000173047 701 ntBASIC14.96□□□□□ -0.01
NpcdF8VQB8 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.96□□□□□ -0.01
NpcdF8VQB8 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.96□□□□□ -0.01
NpcdF8VQB8 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.96□□□□□ -0.01
NpcdF8VQB8 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.96□□□□□ -0.01
NpcdF8VQB8 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.96□□□□□ -0.01
NpcdF8VQB8 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NpcdF8VQB8 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NpcdF8VQB8 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
NpcdF8VQB8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.95□□□□□ -0.02
NpcdF8VQB8 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.95□□□□□ -0.02
NpcdF8VQB8 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.95□□□□□ -0.02
NpcdF8VQB8 Gm15573-201ENSMUST00000119487 540 ntBASIC14.95□□□□□ -0.02
NpcdF8VQB8 Gm13315-201ENSMUST00000120376 991 ntBASIC14.95□□□□□ -0.02
NpcdF8VQB8 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.95□□□□□ -0.02
NpcdF8VQB8 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Gm5852-201ENSMUST00000194119 1021 ntBASIC14.95□□□□□ -0.02
NpcdF8VQB8 Gm5542-201ENSMUST00000195485 1089 ntBASIC14.95□□□□□ -0.02
NpcdF8VQB8 Gm2517-201ENSMUST00000215651 348 ntBASIC14.95□□□□□ -0.02
NpcdF8VQB8 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
NpcdF8VQB8 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NpcdF8VQB8 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Rubie-203ENSMUST00000227803 2430 ntBASIC14.94□□□□□ -0.02
NpcdF8VQB8 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Gm14724-201ENSMUST00000118400 537 ntBASIC14.94□□□□□ -0.02
NpcdF8VQB8 Gm12628-201ENSMUST00000122193 382 ntBASIC14.94□□□□□ -0.02
NpcdF8VQB8 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.94□□□□□ -0.02
NpcdF8VQB8 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NpcdF8VQB8 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Mir7221-201ENSMUST00000184009 72 ntBASIC14.94□□□□□ -0.02
NpcdF8VQB8 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.94□□□□□ -0.02
NpcdF8VQB8 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC14.94□□□□□ -0.02
NpcdF8VQB8 Gm7902-201ENSMUST00000198842 947 ntBASIC14.94□□□□□ -0.02
NpcdF8VQB8 Gm5298-201ENSMUST00000201122 892 ntBASIC14.94□□□□□ -0.02
NpcdF8VQB8 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.94□□□□□ -0.02
NpcdF8VQB8 Gm8325-201ENSMUST00000099086 453 ntBASIC14.94□□□□□ -0.02
NpcdF8VQB8 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NpcdF8VQB8 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms