Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.76□□□□□ -0.37
Atf6F6VAN0 Snora78-201ENSMUST00000158630 128 ntBASIC12.76□□□□□ -0.37
Atf6F6VAN0 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.76□□□□□ -0.37
Atf6F6VAN0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.76□□□□□ -0.37
Atf6F6VAN0 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6F6VAN0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6F6VAN0 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Atf6F6VAN0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Atf6F6VAN0 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Atf6F6VAN0 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Atf6F6VAN0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6F6VAN0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6F6VAN0 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6F6VAN0 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Atf6F6VAN0 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6F6VAN0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6F6VAN0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6F6VAN0 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6F6VAN0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6F6VAN0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6F6VAN0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6F6VAN0 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Gm23931-201ENSMUST00000103842 109 ntBASIC12.75□□□□□ -0.37
Atf6F6VAN0 Gm22018-201ENSMUST00000104357 131 ntBASIC12.75□□□□□ -0.37
Atf6F6VAN0 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Gm6023-201ENSMUST00000118217 606 ntBASIC12.75□□□□□ -0.37
Atf6F6VAN0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Gm24548-201ENSMUST00000158650 108 ntBASIC12.75□□□□□ -0.37
Atf6F6VAN0 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.75□□□□□ -0.37
Atf6F6VAN0 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.75□□□□□ -0.37
Atf6F6VAN0 Gm43930-201ENSMUST00000203868 845 ntBASIC12.75□□□□□ -0.37
Atf6F6VAN0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Gm6007-201ENSMUST00000208170 823 ntBASIC12.75□□□□□ -0.37
Atf6F6VAN0 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.75□□□□□ -0.37
Atf6F6VAN0 Gm45930-201ENSMUST00000221330 292 ntBASIC12.75□□□□□ -0.37
Atf6F6VAN0 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.75□□□□□ -0.37
Atf6F6VAN0 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6F6VAN0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.74□□□□□ -0.37
Atf6F6VAN0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Gm13736-201ENSMUST00000119272 253 ntBASIC12.74□□□□□ -0.37
Atf6F6VAN0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Gm19087-201ENSMUST00000191430 946 ntBASIC12.74□□□□□ -0.37
Atf6F6VAN0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.74□□□□□ -0.37
Atf6F6VAN0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.74□□□□□ -0.37
Atf6F6VAN0 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.74□□□□□ -0.37
Atf6F6VAN0 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.74□□□□□ -0.37
Atf6F6VAN0 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.74□□□□□ -0.37
Atf6F6VAN0 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Gm24136-201ENSMUST00000083374 165 ntBASIC12.74□□□□□ -0.37
Atf6F6VAN0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.74□□□□□ -0.37
Atf6F6VAN0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atf6F6VAN0 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms