Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm13996-201ENSMUST00000118456 430 ntBASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Rprl1-201ENSMUST00000158050 327 ntBASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Gm44262-201ENSMUST00000204969 372 ntBASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb9E9Q5G2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Gm2383-201ENSMUST00000181461 807 ntBASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb9E9Q5G2 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms