Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Gm13019-201ENSMUST00000120000 276 ntBASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Gm5555-201ENSMUST00000120352 1111 ntBASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Gm15566-201ENSMUST00000121130 590 ntBASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 AC134537.1-201ENSMUST00000219205 265 ntBASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Dchs1E9PVD3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Gm7719-201ENSMUST00000182374 975 ntBASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Gm5641-201ENSMUST00000091130 1488 ntBASIC10.7□□□□□ -0.7
Dchs1E9PVD3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Erich3-203ENSMUST00000189969 3460 ntBASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Dchs1E9PVD3 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Gm25063-201ENSMUST00000104666 94 ntBASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Gm20414-201ENSMUST00000172918 646 ntBASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Gm43184-201ENSMUST00000197247 542 ntBASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.69□□□□□ -0.7
Dchs1E9PVD3 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms