Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Gm27892-201ENSMUST00000185017 106 ntBASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Gm5896-201ENSMUST00000189662 1024 ntBASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Gm38092-201ENSMUST00000195600 653 ntBASIC9.47□□□□□ -0.89
Gm5878E9PUB3 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 CT009495.1-201ENSMUST00000224221 862 ntBASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Gm10146-201ENSMUST00000072739 309 ntBASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Gm9519-201ENSMUST00000206108 1337 ntBASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 AC140393.3-201ENSMUST00000228396 1352 ntBASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 AC158595.1-201ENSMUST00000217989 1435 ntBASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Gm5878E9PUB3 Pck2-205ENSMUST00000226352 2784 ntBASIC9.46□□□□□ -0.89
Gm5878E9PUB3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Gm5878E9PUB3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Gm5878E9PUB3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Gm5878E9PUB3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC9.46□□□□□ -0.89
Gm5878E9PUB3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Gm5878E9PUB3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Gm5878E9PUB3 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Gm5878E9PUB3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Gm5878E9PUB3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Gm5878E9PUB3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Gm5878E9PUB3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Gm5878E9PUB3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Gm5878E9PUB3 Gm37902-201ENSMUST00000192839 1683 ntBASIC9.46□□□□□ -0.89
Gm5878E9PUB3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Gm5878E9PUB3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Gm5878E9PUB3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Gm5878E9PUB3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Gm5878E9PUB3 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Gm13492-201ENSMUST00000119772 665 ntBASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Gm5834-201ENSMUST00000126680 1026 ntBASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Rmrp-201ENSMUST00000157463 271 ntBASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Gm4271-201ENSMUST00000174444 973 ntBASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Gm32025-201ENSMUST00000217960 307 ntBASIC9.46□□□□□ -0.9
Gm5878E9PUB3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC9.46□□□□□ -0.9
Gm5878E9PUB3 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Gm5356-201ENSMUST00000093326 615 ntBASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Gm5878E9PUB3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms