Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Gm6458-201ENSMUST00000211573 635 ntBASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Gm6091-201ENSMUST00000098307 165 ntBASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Gm27331-201ENSMUST00000183705 60 ntBASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Gm29649-201ENSMUST00000185649 419 ntBASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm28043E0CXC2 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.47□□□□□ -0.41
Gm28043E0CXC2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Mir686-201ENSMUST00000102174 109 ntBASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Gm11637-201ENSMUST00000120601 592 ntBASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Gm4271-201ENSMUST00000174444 973 ntBASIC12.47□□□□□ -0.41
Gm28043E0CXC2 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Gm8602-201ENSMUST00000184045 607 ntBASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Gm29705-201ENSMUST00000212598 474 ntBASIC12.47□□□□□ -0.41
Gm28043E0CXC2 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.47□□□□□ -0.41
Gm28043E0CXC2 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms