Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hfm1D3Z4R1 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Gm4862-201ENSMUST00000170405 438 ntBASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Gm43852-201ENSMUST00000202098 917 ntBASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Gm3017-201ENSMUST00000203603 1126 ntBASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Gm2553-201ENSMUST00000215986 605 ntBASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Gm17213-201ENSMUST00000165161 1360 ntBASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Matn2-206ENSMUST00000228570 2798 ntBASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hfm1D3Z4R1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Hfm1D3Z4R1 Gm38346-201ENSMUST00000192379 2639 ntBASIC17.14■□□□□ 0.34
Hfm1D3Z4R1 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Hfm1D3Z4R1 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
Hfm1D3Z4R1 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Gm7150-201ENSMUST00000122032 981 ntBASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Gm26134-201ENSMUST00000178484 110 ntBASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Gm5706-201ENSMUST00000181525 993 ntBASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Gm6108-201ENSMUST00000208365 367 ntBASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Gm45410-201ENSMUST00000211331 1093 ntBASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 CT030653.1-201ENSMUST00000224382 1279 ntBASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 CT009536.2-201ENSMUST00000225370 665 ntBASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 AC165154.1-201ENSMUST00000226661 340 ntBASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hfm1D3Z4R1 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Gm9034-201ENSMUST00000182071 1005 ntBASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Gm7541-201ENSMUST00000118361 535 ntBASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Gm7902-201ENSMUST00000198842 947 ntBASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Gm44315-201ENSMUST00000203041 219 ntBASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Gm5805-201ENSMUST00000072779 456 ntBASIC17.13■□□□□ 0.33
Hfm1D3Z4R1 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms