Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Gm17391-201ENSMUST00000171036 126 ntBASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Gm43184-201ENSMUST00000197247 542 ntBASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Gm43916-201ENSMUST00000205062 967 ntBASIC14.35□□□□□ -0.11
Clrn2B2RVW2 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn2B2RVW2 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Gm11509-201ENSMUST00000117358 325 ntBASIC14.34□□□□□ -0.11
Clrn2B2RVW2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.34□□□□□ -0.11
Clrn2B2RVW2 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Clrn2B2RVW2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clrn2B2RVW2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Clrn2B2RVW2 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Clrn2B2RVW2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clrn2B2RVW2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clrn2B2RVW2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms