Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Gm13316-201ENSMUST00000140537 691 ntBASIC12.54□□□□□ -0.4
Rrn3B2RS91 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Olfr582-201ENSMUST00000098212 960 ntBASIC12.54□□□□□ -0.4
Rrn3B2RS91 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.54□□□□□ -0.4
Rrn3B2RS91 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.54□□□□□ -0.4
Rrn3B2RS91 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Gm27516-201ENSMUST00000184237 98 ntBASIC12.53□□□□□ -0.4
Rrn3B2RS91 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.53□□□□□ -0.4
Rrn3B2RS91 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.53□□□□□ -0.4
Rrn3B2RS91 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrn3B2RS91 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rrn3B2RS91 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rrn3B2RS91 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.52□□□□□ -0.4
Rrn3B2RS91 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rrn3B2RS91 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rrn3B2RS91 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rrn3B2RS91 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rrn3B2RS91 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rrn3B2RS91 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Rrn3B2RS91 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rrn3B2RS91 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rrn3B2RS91 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Rrn3B2RS91 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Gm14723-201ENSMUST00000118686 215 ntBASIC12.52□□□□□ -0.41
Rrn3B2RS91 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Gm2991-201ENSMUST00000173338 480 ntBASIC12.52□□□□□ -0.41
Rrn3B2RS91 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.52□□□□□ -0.41
Rrn3B2RS91 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.52□□□□□ -0.41
Rrn3B2RS91 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms