Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.03□□□□□ -0.64
Gm11127A7VMS2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 BC043934-202ENSMUST00000185694 2356 ntBASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Gm11127A7VMS2 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm11127A7VMS2 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm11127A7VMS2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.02□□□□□ -0.64
Gm11127A7VMS2 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Gm11127A7VMS2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm11127A7VMS2 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.02□□□□□ -0.64
Gm11127A7VMS2 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm11127A7VMS2 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.02□□□□□ -0.64
Gm11127A7VMS2 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm11127A7VMS2 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Gm14350-201ENSMUST00000116642 640 ntBASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Gm16202-201ENSMUST00000117532 544 ntBASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm11127A7VMS2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.01□□□□□ -0.65
Gm11127A7VMS2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms