Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Gm45925-201ENSMUST00000218882 744 ntBASIC12.71□□□□□ -0.37
Tubb1A2AQ07 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.71□□□□□ -0.37
Tubb1A2AQ07 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tubb1A2AQ07 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tubb1A2AQ07 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tubb1A2AQ07 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tubb1A2AQ07 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tubb1A2AQ07 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tubb1A2AQ07 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tubb1A2AQ07 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tubb1A2AQ07 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tubb1A2AQ07 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Tubb1A2AQ07 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tubb1A2AQ07 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Tubb1A2AQ07 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tubb1A2AQ07 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tubb1A2AQ07 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.71□□□□□ -0.38
Tubb1A2AQ07 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tubb1A2AQ07 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tubb1A2AQ07 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tubb1A2AQ07 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tubb1A2AQ07 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Tubb1A2AQ07 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tubb1A2AQ07 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tubb1A2AQ07 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tubb1A2AQ07 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Tubb1A2AQ07 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Gm13316-201ENSMUST00000140537 691 ntBASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Gm45784-201ENSMUST00000188360 142 ntBASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Gm5781-201ENSMUST00000219792 443 ntBASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.7□□□□□ -0.38
Tubb1A2AQ07 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Gm13875-201ENSMUST00000120162 282 ntBASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Gm27514-201ENSMUST00000183692 110 ntBASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Gm42937-201ENSMUST00000197360 752 ntBASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Gm6007-201ENSMUST00000208170 823 ntBASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Gm5904-201ENSMUST00000210286 865 ntBASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Tubb1A2AQ07 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms